Ictalurus punctatus (channel catfish): 108260041
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Entry
108260041 CDS
T04658
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X2
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108260041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108260041
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108260041
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108260041
NCBI-ProteinID:
XP_017315455
Ensembl:
ENSIPUG00000013470
UniProt:
A0A2D0QDL1
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Position
28:complement(13953361..13969405)
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AA seq
783 aa
AA seq
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MEPFSLDTDDRSDEERTKTKANKKDRQAYGKAKAPMDTELAEDHGDFACQVRINLNFSDE
IQGIKAEPDQHERFDIKRLFDAVSKGDVNRLVSLEEYLIKTNKKLTNNEYRPNGKTALMK
ALLNLKNGDNKAVEHLLGIAERMGHLDKLVNAAYTDPYYEGQTALHIAIERRNKRYVELL
IQKGANVHAKACGTFFQPLDEACFYFGELPLSLAACTNQKDIVDLLMDKADVRCTDTLGN
TVLHALMMVADNSPENTDFVISMYDYILTKDAAKNPKEKKLEDIENNQGLTSIKLAAKLG
RIGLFEHILHREFQQEECRHLSRKFTEWAYGPVYASLYDLDSVDSYEPNSVLEIVVYGTE
IPNRLEMLQTEPLNKLLEDKWNRYAHRIFLFKFIVYIIYLIIFTTVSYYREEGTDEKRPP
FPIRIYTPKNVERKIPDGYLLFAGQVIMAIGSLYFFISVLMNIKRKRPSLKTLLVDGYSE
LLFLLQAVFFIICAGLYCGGMDEYLAFLVLSVALCWVNVLYFSRGTRHMGIYSVMIQKMI
LSDILRFLFVYVVFLFGFSAAIVTLLKDDREEFNATARNNRTQGRSFFIDDPNPAEGCNK
PTFKTIAFTTLELFKFTIGMGDLEFTEKYEYKHVFYVLLITYIVLTYILLLNMLIALMSK
TVEKMSKESTGIWKLQRAITILDLERYAFCLKNKLRSGVRRNLGKSQDDWRWCLRVEEVN
WKKWNRNLGIISEDPGECNTVMKTGSQREPSRRGFLREISRRRPNTRMDPSRQETEPLAS
SPV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttttctttggacacagatgacaggtcggatgaggagaggactaagaccaaa
gcaaataaaaaggatcgtcaagcgtatggaaaggccaaagcaccaatggatactgaactt
gcagaggatcatggtgattttgcttgccaagtccgaatcaacctgaacttttctgatgaa
atacaagggataaaagccgaaccagatcagcacgagaggtttgacattaagaggcttttt
gatgccgtgtccaagggtgacgtcaataggctggtgagcctggaggagtatctgattaaa
acaaataagaagctgacaaacaatgaatatcggcccaatgggaagacagccctgatgaag
gctctgctaaacctgaaaaatggagataacaaagcagtggaacacttgctgggtatcgca
gagagaatgggacatctggataagctagtgaacgcagcatatacagatccctactatgaa
ggacagacagctcttcatatagccattgagaggaggaacaagcgttatgttgagctgctc
attcagaaaggggctaatgtccatgcaaaggcttgtgggacattcttccaaccacttgat
gaagcatgtttttactttggggagcttcctctttctctggcagcgtgtactaatcagaaa
gacatagtggaccttctgatggataaagcagacgtgaggtgtacggacactctgggcaac
acggttcttcatgcgcttatgatggtggctgataacagccctgaaaatacagacttcgtc
atttccatgtacgactacattcttaccaaagacgccgctaagaatcccaaagaaaagaag
ctggaggacattgagaacaatcagggacttacttccatcaagctggctgcgaagctagga
aggattgggttgtttgaacacattctgcatcgcgagttccagcaagaagagtgcagacat
ctgtcccgaaagttcacagagtgggcgtatggcccggtgtacgcttcactatatgacctg
gactctgtggactcctacgagccaaactctgtcctggagatagttgtttatggcacagaa
atacctaatcgtctcgagatgctccaaactgagccacttaataaactgctggaagacaaa
tggaacagatacgcccaccggatattcctcttcaagtttattgtttatatcatatacctc
atcatcttcacaactgtgtcttattaccgtgaagaaggaacggatgaaaaacgaccccca
tttccaattaggatttatactccgaaaaacgttgagagaaagattccagatggctactta
ctgtttgccggacaggtcatcatggctatcggatcactctacttcttcatcagtgtgctg
atgaatataaagagaaagcggccaagtctgaaaacactgctggtagacgggtattctgag
ctgctttttttattgcaggctgtattctttatcatctgtgcggggctgtattgcggcggg
atggacgagtatcttgccttcctggtgctcagtgtggctctgtgctgggttaatgtgctc
tacttttctagaggaacccgacacatgggcatctacagcgttatgattcagaagatgatt
cttagcgacatcttgcgcttcctcttcgtatacgtggtctttctctttggattttcagca
gctatcgtgactctactcaaagatgaccgtgaagagtttaatgcaacagcccggaataac
cgcacgcaggggcggtctttttttatagacgatccgaacccagctgaaggctgcaacaaa
cccacctttaaaaccatcgccttcaccactctggagctgtttaagttcactataggcatg
ggcgacctggagttcacggagaagtacgagtataaacacgtattttatgtgctacttata
acctacattgtgctcacgtacattctgctgctgaacatgctgattgctctgatgagcaag
actgtggagaagatgtccaaggaaagcaccggtatctggaaactacagcgtgccatcacc
atattggatctggagagatacgcattctgtctgaagaacaagttgcgctcaggagtaagg
aggaacctgggcaaaagtcaggacgactggcgctggtgtctcagagtggaagaagtcaac
tggaaaaaatggaaccgcaacctgggcatcatcagcgaggatcctggagaatgcaacaca
gtgatgaagactggatctcaaagagagcccagccggcgtgggttcctacgtgaaatcagc
cgacggaggcccaacactcgtatggacccgtcacggcaggagacagaacccctggcatct
agtccagtgtaa
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