Ictalurus punctatus (channel catfish): 108260062
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Entry
108260062 CDS
T04658
Name
(RefSeq) RIMS-binding protein 2 isoform X1
KO
K19922
peripheral-type benzodiazepine receptor-associated protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108260062
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
108260062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIMB1_N
SH3_2
Ig_RIMBP2
SH3_9
SH3_1
fn3
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
108260062
NCBI-ProteinID:
XP_053532815
Ensembl:
ENSIPUG00000012129
UniProt:
A0A9F7TH99
LinkDB
All DBs
Position
28:complement(13259809..13400901)
Genome browser
AA seq
1740 aa
AA seq
DB search
MKKSKQGLESSSEKEDSGKSPLGSSPVEEKSNKGDFSETLPDVGWELQSSDPSLEKLSPS
RCSEDNMEDTNGADYDYLVRQNSELLSALEDLEKTVSTLREENSLLRKSSCPETEDKVKR
LRRKNAELAVIAKRLEERAHKLQEANLKVVNAPIPIKPGAVEQYKRAFARQRARDLAQHA
DTLLSKDKEIAALQHECRQLEAKIGQDKQGGPDPAGAGEFERLLKESQKEVLRLQRQLSV
SSARDQSSAGGAEKEREQKEAPVVCETAQPVVDEVLVKGEETHGEEEEESRAQVTPEKDT
SSAHQEEQTQKDRIEFLESELSKKRKECEGLEHEARKRQKRCLDLESQLEDECIKNERLT
EEAELLRSKAQLLEQSQVENEELKGELSAVSARYSSVLEENQRLRAKLENLEQVLKHMRE
VAERRQQLELEHEQALAILKFKQDEIKRLQRAQLFAKREHEGVVQMLEGLIQFVLLRELA
KVRELEQKCRNQSEQFSLLSQELDKFRQQASKIDLSAPGLLCSGLTQLPNGLSLPTDTGT
SASWDDIAFWSLEGNEALCDVSEQDLSAVLRAGLAPYSAGLSHSGRSPGTKHRELPSLNP
KSASTSSASPPKSENTHLSPKSAANSRKASPTHEVDTASEVEELDIDVSPVPFAASRGAA
KLQVFIARYSYNPYDGPNDNPEVELPLTAGEYIYVYGDMDDDGFYEGELMDGRRGLVPSN
FVERVSDDEAHEATDFSHNSFLESSIHSASERPHQHQHHVRLGQSITDRTEASATSDISK
AGTVPFVNGLDLDLDLEDDTEAHIMPHPHKLTLIKQLAKSIVLGWEAPPGGVTVRSYNIY
VDQKLRLSVPTGNPTKAVLEQMDTSHKAHHVAVQSVMEHGASDPLRCCMRVGKDVSAAPT
ELRVERIMATSARVTWLPSNSSYAHAVSLNGELRELVQAGRYSLRLGDLMPGLHYRVEVE
AQLPSERRERKCAVTSFTTLTAGPPDAPLDVQLEQGPTPGIAQVSWLPVTIDAAGTSNGV
RVTGYTIYADKKKVLEVSSPTAGSALIGPSQIEMLQAARELTVRTMSPHGESANSTPVNV
PAKLPAIMAGASMPPCQPVPAHASVLTAGAANKESSVRATSLSAAKTPMMPLSSILDTNP
PSPIMDVYANTPKVATSDAPLPIASYVEAWANPAVAAQEAGPLPVASANLQETVPAATVV
PTPVPVPVPMPTASVLATPAQPSVALTPTLEPSRDTNSPGQQHSVSDFLDDPMPHKSSPT
PSVARVMVPGTDMLDVPDTHPLRPPNPSPVESEPEGDRENTRLVSIEEFLRPELVPRTKI
YAGGLMDPPPDYHVESSRSDLSDILEEEEEDLYSESAVDVSPKKGNSGPAGREAAGLADS
GPAWCGPRDISPKLNRSDTRLPRDVAEPRPIGDSEVRIFVALFPYDPSTMSPNRDAAEEE
LPFREGQIIKVYGDKDADGFYRGESGGRHGYVPCNMVSEIQVDDEETRDQLLQQGFLSTE
TSIEKMGARSLAQLPHRPAPPPKPRRSKKVESTGVLEDSSNTESSNQDNARHSVIAMGNP
VPRRMVAIFDYDPRESSPNADIEAELTFNAGDIIYVFGDMDDDGFFYGDLNGQKGLVPSN
FLQAFPENGDDSAEPEHTLASSRRDSQVSHAASVDQTEPLKSSPPDETQTEPNSQPESLL
PNQQPEHHPGPSPLSGHPLPVLHPPGDHAVTNTSPPGKKKKGFFSKGKKLFKKLGSSKKE
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagcaaacaggggttggaaagctcatctgaaaaggaggattctgggaaaagc
cccctcggttcttcgccagtggaagaaaagagcaacaagggggatttttctgagacttta
cctgatgtgggttgggaactccagagttctgatccatctctggaaaagttgtctccttcc
agatgttcagaggacaacatggaagacacgaacggcgcagattatgactatctagtgcgg
cagaactctgagcttctgagcgcactggaggacctggagaagaccgtctccacgctccga
gaagagaacagcctcctgcggaagagcagttgtcctgagacggaggacaaggtgaagagg
ctgaggaggaaaaatgctgagctggctgtcatcgcaaagcgtctggaggagagggcacac
aaactgcaggaggccaatcttaaagtggtgaatgcccccatccctataaaacctggcgcg
gtagagcaatataagagagcgtttgcgaggcagcgggcacgagacctagctcagcacgca
gacacactcctctccaaagacaaggagatcgccgcactgcagcacgagtgccgacagcta
gaggccaaaataggacaggacaaacagggtggtcctgatccagcaggagcaggggagttt
gagcggttgctgaaggagtctcagaaggaggtgctgcgtctgcagaggcaactctcggtc
agctcagctcgggaccagagctcagccggaggagccgagaaagagcgagaacaaaaagag
gcacccgttgtatgtgaaactgcacagcctgtagttgatgaagtccttgttaagggggag
gaaacccatggagaggaggaggaggagtctagagcacaagtaaccccagagaaggacact
agctccgcccaccaggaagaacagacacaaaaggaccgtatagagtttctggaaagtgag
ttgagtaagaagagaaaagaatgtgagggtctcgagcacgaagcaaggaagaggcagaag
agatgtctcgatttggagagccagcttgaggatgagtgcatcaaaaatgagcgactaaca
gaggaggctgaactcctcaggagcaaggctcagctgcttgagcagtcccaggttgagaat
gaggagctgaagggggagctctctgcagtgagcgctcggtatagttcagttctcgaggag
aaccagagactccgtgccaagctggagaacctagagcaggtcctaaagcatatgcgagag
gtcgcagagcgcaggcagcagctggaactggaacatgagcaggcactggctatcctcaag
ttcaaacaggatgaaatcaaacgacttcagcgggctcagttatttgccaagagggaacat
gaaggagttgtgcaaatgctggaggggttgatccagtttgtattgctgagagagctggcg
aaggtacgggagctggagcagaagtgccgtaatcagagcgagcagttcagccttctcagt
caagagctggacaaattccggcagcaggcctctaagatcgacctatcggctcctgggctg
ctgtgctccggcctcacgcaacttcctaacggcctcagtctgcccacagacaccggcact
agtgcctcatgggatgacatcgccttctggagtctggagggtaacgaggccctctgtgac
gtctctgagcaggatttgtctgctgtgcttcgggccggcttggcgccatactcggcgggt
ctgtcccattccgggcgctcgccaggcaccaaacaccgcgagctgcccagcctaaacccg
aaatctgcctccacgtccagtgcgtctcctcccaagtctgaaaacacacacctgtcgccg
aaatcagccgcaaactcgcgcaaagccagccccactcacgaggtggacactgccagtgag
gttgaggaactggacattgatgtgtcccctgttcccttcgcagccagtcgaggagctgct
aaacttcaggttttcatcgcccgttacagctacaacccatatgatggcccaaacgataac
ccagaggtggagctgcctctcacagcaggggaatacatctacgtatacggagacatggac
gatgatggcttctatgaaggtgaattgatggatggccgtcgaggcctggtgccatccaac
tttgtagagcgtgtctcagacgacgaggcacacgaagccaccgacttttcccacaactcc
ttcctggagagcagcattcacagcgcctcagagagaccacatcagcaccagcaccatgtg
cgtttaggccaaagcatcacagacaggacagaggcctcggctaccagcgacataagcaaa
gccggcactgtgcctttcgtgaatggcttggacctggatctggacttggaggatgatacg
gaggctcacatcatgcctcatcctcacaagctgactcttatcaaacagctagctaagagc
atagtgttgggttgggaggcacccccaggaggagtcacagtgcggagctataacatctac
gtggaccagaaactgcgtctcagcgtgcccacggggaatccgacgaaggccgtgttagag
cagatggatacgagccataaggctcaccatgtggctgtgcagagtgtgatggagcatggc
gcctcagacccgttgcgctgctgcatgcgcgtagggaaggacgtgtccgcagcacccact
gaactgagggtagaacgcatcatggccacttcagcccgtgtaacctggctgcctagcaac
agcagttacgcacatgcagtctctttgaatggtgagctgcgcgagttggtgcaggctggc
agatactcactgcgccttggtgaccttatgcctggtctgcactaccgtgtggaggtggag
gcacaactgccatcagagcggagggagcgcaagtgtgctgtaacctccttcaccacactt
accgcaggtcctcctgatgctcctctggatgtgcagctggaacaggggccaacccccggg
attgctcaagtcagctggctccctgtcactattgatgctgctgggacttccaacggggtc
cgtgtcaccggctacaccatctatgctgacaagaagaaggtcttggaggtgtcctcgccc
acagcgggcagtgctctaatcggtccttctcagattgaaatgcttcaagcggcgcgcgag
ctcaccgtacgcaccatgtctcctcatggtgagtcggccaactcgacgcccgtgaatgtg
cctgccaagctacctgccataatggcaggtgcctccatgcctccctgccagcctgtgcca
gcccacgccagtgtcctaaccgccggtgccgccaacaaggagtccagtgtccgtgccacc
tctctgtcagctgccaaaacgcccatgatgccactcagctctatactagacacaaatcct
ccttctcccatcatggatgtctatgccaatacacccaaagttgccaccagtgatgcccct
ctgcccattgcctcatatgtcgaggcatgggcgaatccagctgtggctgcgcaggaggca
gggccacttcccgttgctagtgccaacctgcaggaaactgtacctgcagcaacagttgtg
cccactcctgtgccagtcccagtgcccatgcccacagccagtgttctggcaactccagct
cagcccagtgtagcccttacaccaacgctggagcctagccgagacaccaatagcccaggg
caacaacattccgtctctgatttcctggatgaccccatgccacacaagtcatcacccacc
cccagtgtggccagagtcatggtccctgggacagatatgctcgacgtgcccgatacacat
cccctgcgtccacctaacccctcacccgtagagtcggagccggagggtgatagggagaac
actcgtttggtctccatcgaagagttcctccggcctgaacttgtgcccagaacaaagata
tatgcaggaggtctgatggaccctcctcctgactatcatgtggaaagcagccgttcagac
ctatccgatatcctggaggaggaggaagaagatctgtactccgagtctgccgtcgatgta
tcacccaagaagggcaactctggacctgcaggcagggaggctgccggtctagcggactcg
ggaccagcctggtgcggccccagagacatctctccaaagttaaatcgatcggacaccaga
ttgcctagagatgttgccgagccaaggccaatcggtgacagtgaagtacggattttcgtt
gccctcttcccatacgatccttcaacaatgtcacccaatcgtgatgcagcagaggaggag
cttcccttcagggagggacagatcattaaggtctacggtgataaggacgcagatgggttt
taccggggcgagtcaggtggccgtcacggttatgtgccctgtaacatggtctctgagatt
caggtggacgatgaggagaccagagatcagctgctacagcagggcttcctgtccaccgag
acttctatagagaagatgggcgcacgctcactcgctcagcttccgcaccgtccggctcca
ccacccaaacctagacgctccaagaaagtggaatctacaggagttttggaggacagttct
aacactgagtcctccaaccaagataatgcacgacactcagtcattgccatgggaaaccct
gtgcctcgcaggatggtggccatctttgattacgacccaagagaaagctcccctaatgct
gacatagaggctgagctgacttttaacgctggagacatcatctatgtgtttggagacatg
gatgacgatggcttcttttacggggatttaaatggacagaaagggctggtaccttccaac
ttccttcaggcttttcccgagaacggggatgactcagcagaacccgagcacactctagcc
agcagccggagagactcacaggtgagtcacgctgcgtctgtagaccagacggagccccta
aagtcaagccctccagacgagacccagactgaacccaattctcaacctgaatcgctcctt
ccaaaccagcagcctgagcaccacccgggtccttctccattatcaggccatcctcttcct
gtcctccatcccccaggggaccatgctgtcaccaacacctctccacctggcaaaaagaaa
aaaggtttcttctctaaagggaagaagctcttcaagaagctgggctccagcaagaaggaa
taa
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