Ictalurus punctatus (channel catfish): 108260083 Help Entry 108260083         CDS       T04658                                  Name (RefSeq) DNA ligase 3   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03410   Base excision repair Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     108260083  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ipu03400]     108260083 Enzymes [BR:ipu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      108260083 DNA repair and recombination proteins [BR:ipu03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      108260083 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  108260083 NCBI-ProteinID:  XP_017315528 Ensembl:  ENSIPUG00000023929 UniProt:  A0A2D0QB60 LinkDB All DBs Position 28:4786381..4799678 Genome browser AA seq 1000 aa AA seqDB search MHGLGFCKAARTLCRTFRLCQTQSTCPFLLQYCCPLIHAWGFALSARPPSRRFGLSSQAF LAVSRATWQDERTTMAEQRFCVEYAKRGQAGCKKCKERIMKGLVRIGKIVPNPFSESAGE MKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDEEKELINKLVAELAAKANASPK KKVQAKLNTSGQLSAPPADPTVNAPRKFSGFTATKAGPSSSSPGPSPAKASQGSTLSTQF CQQDHKDCLFREFRKLCAMVAEKSSYNAKTEIIKDFLKKGSAGDKFKGDLYLTVKLLLPG VVKSVYNLNDKQIVKLFSRILNCNQDEMVRDLTQGDVSETVRMFFEASNSFPPSTKSLLT IQEVDASLTRLAQLTKEDEQQAELEDIAKKCTGNDLKCYIRLVKHDLKINSGAKHVLDAL DPNAYDAFKASRNLGDVIDRVLRNQQEASNGGGPRKHLSVEATLMTPVQPMLAEACKSIE YAMKKCPNGMYSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFAGGQ SMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDAQVCLFVFDCVYFNGVSLMDKPLCER RKFLHDNMVEVPNRILFSEMKHVTRAADLAEMITRVIREGLEGLVLKDVKGAYEPGKRHW LKVKKDYLNEGAMADTADLVVLGAFFGTGSKGGIMSSFLMGCYDPTTKKWCTVTKCSGGY DDATLARLQKELDVIKIGKDPSKIPPWLKIVKNYYPDFLIRDPEKAPVWEITGAEFSKSE MHTADGISIRFPRCTRMRDDKDWKTATNLPQLKELYRVSKERCDFEVTERPSTSSKDDKG SSGGDSGGSSPSTSNGAASSKLAKNGHTPKRKPAKPVTPSPAKRKLPTEEHCAKKIKVET FHDNGQSKATASPAKAADPQPEKTLLNIFTGVKLHLPESVQEFEKLRRYFVAYDGDLVPD YDAASATHTLADPEEGSQAQKVSSNWIWQCVRKRRVVPPC NT seq 3003 nt NT seq  +upstreamnt  +downstreamnt atgcatgggctcggcttttgcaaggcagcaagaaccctctgcaggactttccgtctgtgc cagacacaaagcacgtgtccgttcctcctgcagtactgttgccctctgatccacgcttgg ggctttgccttgtcagcgagaccgccgtcgagacgcttcggtctctcatctcaggctttc ctcgccgtctctcgggccacgtggcaggacgagcggacgaccatggctgagcagagattc tgtgtggagtatgccaagcgaggccaggcaggctgcaaaaaatgcaaggagaggatcatg aaggggctggtgcgcatcgggaagattgtgcccaacccgttcagcgagtctgcaggagag atgaaggagtggtatcacgtcaagtgcatcttcgaaaagctggagcgtgcgcgggccacc accaagaagatcgaggacattactgacctggagggctgggaagaattgcaggatgaggaa aaagagctgatcaataagcttgttgcagaactggctgctaaggctaacgcaagtccaaag aagaaggtgcaggccaagttaaacaccagcggccagttatcagctcctcctgctgatccg acggtgaacgcgccacgcaagttttccggcttcacagcaacaaaggcaggtccatcttcg tcgagtccagggccatcacccgcaaaagcgtctcagggcagcacgctgtccactcagttt tgccagcaggaccacaaggactgtctgttccgcgagttccgcaagctctgcgccatggtg gccgagaagtccagctacaatgcaaagacagagatcatcaaggacttcctaaagaagggt tctgctggagacaagtttaaaggagatctctacctgacagtgaagctgctcctcccaggc gtagtgaaaagcgtttacaacctcaacgacaagcaaattgtcaaactcttcagccgcatc ctgaactgcaaccaggacgagatggtgcgcgacctaacacagggagacgtgtccgagacg gtgaggatgttttttgaagccagcaactcgtttcctccttcaaccaagagtttgctgacc atccaggaagtggacgcttcgctaactcgcctggctcagctcactaaggaagacgagcag caggcagaactggaggacatcgcgaaaaaatgcactgggaacgacttgaagtgttacatc cgtctggtgaaacatgatctgaagattaattccggtgccaaacacgtcctggatgcttta gaccccaacgcctacgacgccttcaaagcctctcgaaacctcggcgacgtgatcgacaga gtcctgcgcaatcagcaggaggcatcgaacggcggcggcccgaggaagcacttgagtgtc gaggccacacttatgacccccgtgcagcccatgctggccgaagcctgcaagtccatcgag tacgccatgaagaagtgccccaacggaatgtactctgagatcaagtacgacggcgagcgc gtgcaagtgcacaagaacggtgaccacttcagctacttcagccgcagcctcaaacccgtg ctgcctcacaaggtggcccattttaaagacttcataccgcaggcttttgccggaggccag agcatgatcctagatgctgaggttcttctgattgataccaagaccagtaagcctctgccg ttcgggacgctgggagttcacaaaaaagcggcgtttcaagacgcacaagtgtgcctgttt gtttttgactgcgtttattttaacggtgtcagcctcatggacaagccgctttgtgagaga agaaaatttcttcatgataacatggtggaggttccgaacaggattctgttttcggagatg aagcacgtcacgagagctgctgacctggcggaaatgatcacgcgagtcatcagagaagga ctggaaggactcgttctgaaagatgtcaagggggcgtatgaacctggtaaacgtcactgg ctgaaggtgaagaaagattacctgaatgaaggtgcgatggcagacacggccgatttagtg gtcctgggggcgtttttcggaaccggctcaaaaggtggaatcatgtccagtttcctcatg ggctgctacgatcccacgacaaaaaaatggtgcacagtgacgaaatgctccggaggctat gacgacgccacgctggccaggctgcagaaggagctggacgtcattaaaatcggcaaggat cccagcaagattccaccctggctaaaaatagtcaagaactactatccagattttctcatc cgagatcctgagaaagccccagtttgggagatcacaggagccgagttctccaagtcagaa atgcacaccgctgacggcatctccatccgatttccgcgatgcactcgtatgcgtgatgat aaggactggaagacggccaccaaccttccccagctcaaggaactttaccgcgtttcgaag gagaggtgcgactttgaggtgaccgaaaggccgtctacaagcagcaaagacgacaaaggc tcgtcaggaggagacagcggaggcagctcaccgtccacctccaatggagcagcaagctca aagctagccaaaaatggtcatactccaaagcgaaagccggcgaaacccgtaactccatcc cctgccaagaggaagctgcccactgaggaacactgcgcaaagaagattaaggtcgaaaca tttcacgacaacgggcaaagcaaagcaaccgcttctccagctaaggctgctgacccgcag cctgaaaagactctgctgaacatcttcaccggcgtaaaactgcacctcccagaatcggtg caggagtttgagaagctgcggcgctactttgtggcgtacgatggcgatctcgttccggat tacgacgctgcgtctgcgacacacacgctagccgaccccgaggagggcagccaggcgcag aaagtcagctccaactggatctggcagtgcgtaaggaaaagacgagtggttcctccctgc tga

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