Ictalurus punctatus (channel catfish): 108260120
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Entry
108260120 CDS
T04658
Symbol
ppp2r1ba
Name
(RefSeq) protein phosphatase 2, regulatory subunit A, beta a
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04350
TGF-beta signaling pathway
ipu04382
Cornified envelope formation
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108260120 (ppp2r1ba)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108260120 (ppp2r1ba)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108260120 (ppp2r1ba)
04114 Oocyte meiosis
108260120 (ppp2r1ba)
09144 Cellular community - eukaryotes
04530 Tight junction
108260120 (ppp2r1ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108260120 (ppp2r1ba)
09158 Development and regeneration
04382 Cornified envelope formation
108260120 (ppp2r1ba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108260120 (ppp2r1ba)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108260120 (ppp2r1ba)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108260120 (ppp2r1ba)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108260120 (ppp2r1ba)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108260120 (ppp2r1ba)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108260120 (ppp2r1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Cnd1
SCD
Adaptin_N
CLASP_N
M11L
HEAT_ECM29
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
108260120
NCBI-ProteinID:
XP_017315619
Ensembl:
ENSIPUG00000022598
UniProt:
W5UE59
LinkDB
All DBs
Position
28:3468460..3479253
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISHEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRNLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDSRETIIMNHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATCNLTKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKHMLPVVLKMSNDQVANVRFNV
AKSLQKIGPVLDSNSLQTEVKPVLEKLAADQDIDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccgacggcgatgattctctttaccccattgcggtgcttattgacgagtta
agaaatgaagatgtccagttgcggctgaacagcattaagaagctctccaccatcgccctg
gcgttgggtgttgagaggacacgcacagaactgctccctttccttacagatactatctac
gatgaggacgaagtgctccttgcgctcgccgagcagttgggcaacttcaccatgctggtc
ggaggccctgaatatgtgcactgtctccttccaccgttggaaagtctggccacggtagag
gagactgtggtgcgggacaaagctgtggaatcactgcggaagatctcccatgagcactcc
cctgtggacctggaggtgcacttcgagcccctggtaaaacgcctggccagtggcgactgg
ttcacttcacgcacttcagcttgcggtctcttcagcgtctgctacccgcgagtctccagc
accgtcaaagccgagattcgccagcactttcgtaacctttgctctgacgatactccgatg
gtccgccgtgccgctgcgtctaagctgggcgagtttgccaaagtgttggagctggattac
gtcaagagcgatatcatttctctgttcactgcactggcttctgacgagcaggactcggtg
cgtctcttggctgtggaggcctgtgtgagcatcgccacgctgctgccccaggaggacctg
gagtctctagtcatgcccactctgcgccaggccgccgaagacaagtcctggagggtgcgc
tacatggtggcagacaagttctctgagttacaaaaggcagtcggtccagaaatcacaaag
aacgacctcgtgccagccttccagaacctcctcaaagactgtgaggctgaagtgcgcgct
gctgccgccaataaggttaaagaattctgcgagaatttaccggaagacagccgagagacg
atcatcatgaatcatattcttccctgcgtcaaggaactggtttcggacacaaatcagcac
gtcaaatcggctctggcctccgtgatcatgggtttgtcgaccattctgggcaaggacaac
accatcgagcacctgcttcctctcttcctggctcagctcaaagatgagtgtccagaggtt
cgcctgaacataatctctaatctggactgtgtgaatgaggtcatcgggatccgccagctc
tcccagtctctcctccctgccattgtagagcttgcagaagatgccaagtggagggtgcgg
ctggccatcattgaatacatgccgcttttggccggccagctgggtgtggagttctttgac
gagaaactgaattccctgtgcatggcgtggctcgtcgaccatgtatatgccatccgagag
gcagccacctgcaacctgacgaagctggtggagaagtttggtgccgagtgggctcagaac
actattgttcctaaagtgctgggaatggccaacgaccccaactacctgcatcgtatgacc
acgctcttctgcatcaacgctctgtcggaggcgtgcggtcaggagatcaccaccaagcac
atgctccccgtcgtcctgaaaatgtccaacgatcaggtggctaacgtgcgcttcaacgtg
gccaagtctctgcagaagatcggtcctgttctggacagcaactctctgcagacagaggtg
aagcctgtgctggagaaattggccgcagaccaagacatcgacgtcaaatattttgcccaa
gaggccataagtgttcttgccctggcctaa
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integrated database retrieval system
