Ictalurus punctatus (channel catfish): 108260120
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Entry
108260120 CDS
T04658
Symbol
ppp2r1ba
Name
(RefSeq) protein phosphatase 2, regulatory subunit A, beta a
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04350
TGF-beta signaling pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108260120 (ppp2r1ba)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108260120 (ppp2r1ba)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108260120 (ppp2r1ba)
04114 Oocyte meiosis
108260120 (ppp2r1ba)
09144 Cellular community - eukaryotes
04530 Tight junction
108260120 (ppp2r1ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108260120 (ppp2r1ba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108260120 (ppp2r1ba)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108260120 (ppp2r1ba)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108260120 (ppp2r1ba)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108260120 (ppp2r1ba)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108260120 (ppp2r1ba)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108260120 (ppp2r1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Cnd1
SCD
Adaptin_N
CLASP_N
M11L
HEAT_ECM29
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
108260120
NCBI-ProteinID:
XP_017315619
Ensembl:
ENSIPUG00000022598
UniProt:
W5UE59
LinkDB
All DBs
Position
28:3468460..3479253
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISHEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRNLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDSRETIIMNHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATCNLTKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKHMLPVVLKMSNDQVANVRFNV
AKSLQKIGPVLDSNSLQTEVKPVLEKLAADQDIDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgccgacggcgatgattctctttaccccattgcggtgcttattgacgagtta
agaaatgaagatgtccagttgcggctgaacagcattaagaagctctccaccatcgccctg
gcgttgggtgttgagaggacacgcacagaactgctccctttccttacagatactatctac
gatgaggacgaagtgctccttgcgctcgccgagcagttgggcaacttcaccatgctggtc
ggaggccctgaatatgtgcactgtctccttccaccgttggaaagtctggccacggtagag
gagactgtggtgcgggacaaagctgtggaatcactgcggaagatctcccatgagcactcc
cctgtggacctggaggtgcacttcgagcccctggtaaaacgcctggccagtggcgactgg
ttcacttcacgcacttcagcttgcggtctcttcagcgtctgctacccgcgagtctccagc
accgtcaaagccgagattcgccagcactttcgtaacctttgctctgacgatactccgatg
gtccgccgtgccgctgcgtctaagctgggcgagtttgccaaagtgttggagctggattac
gtcaagagcgatatcatttctctgttcactgcactggcttctgacgagcaggactcggtg
cgtctcttggctgtggaggcctgtgtgagcatcgccacgctgctgccccaggaggacctg
gagtctctagtcatgcccactctgcgccaggccgccgaagacaagtcctggagggtgcgc
tacatggtggcagacaagttctctgagttacaaaaggcagtcggtccagaaatcacaaag
aacgacctcgtgccagccttccagaacctcctcaaagactgtgaggctgaagtgcgcgct
gctgccgccaataaggttaaagaattctgcgagaatttaccggaagacagccgagagacg
atcatcatgaatcatattcttccctgcgtcaaggaactggtttcggacacaaatcagcac
gtcaaatcggctctggcctccgtgatcatgggtttgtcgaccattctgggcaaggacaac
accatcgagcacctgcttcctctcttcctggctcagctcaaagatgagtgtccagaggtt
cgcctgaacataatctctaatctggactgtgtgaatgaggtcatcgggatccgccagctc
tcccagtctctcctccctgccattgtagagcttgcagaagatgccaagtggagggtgcgg
ctggccatcattgaatacatgccgcttttggccggccagctgggtgtggagttctttgac
gagaaactgaattccctgtgcatggcgtggctcgtcgaccatgtatatgccatccgagag
gcagccacctgcaacctgacgaagctggtggagaagtttggtgccgagtgggctcagaac
actattgttcctaaagtgctgggaatggccaacgaccccaactacctgcatcgtatgacc
acgctcttctgcatcaacgctctgtcggaggcgtgcggtcaggagatcaccaccaagcac
atgctccccgtcgtcctgaaaatgtccaacgatcaggtggctaacgtgcgcttcaacgtg
gccaagtctctgcagaagatcggtcctgttctggacagcaactctctgcagacagaggtg
aagcctgtgctggagaaattggccgcagaccaagacatcgacgtcaaatattttgcccaa
gaggccataagtgttcttgccctggcctaa
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