Ictalurus punctatus (channel catfish): 108260136
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Entry
108260136 CDS
T04658
Symbol
arhgef15a
Name
(RefSeq) ephexin-1 isoform X1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108260136 (arhgef15a)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108260136 (arhgef15a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
108260136
NCBI-ProteinID:
XP_017315661
Ensembl:
ENSIPUG00000021773
UniProt:
A0A2D0QD68
LinkDB
All DBs
Position
28:complement(20067750..20076924)
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AA seq
907 aa
AA seq
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MHAHAHTHTHTHTHTHARIHAHHHTHNPYHSYSTLHHDRSSKTEGSFGSDVKLLRLKNPL
YSGCVFSLVCGPHQQKHINTHKHIINKQGLDFDKQMAALRPRLTHKPNLPPKPKPHTPNT
STTHTTAATRGDAQDIHTSSLTTTEDFQQTGHTHSSREKEERQKREWRTELQMDAGRSEP
DGSETDEGVKAELSVKSSMMPPHHLDEKHCHCICHLSRPGMKLMWVPMEDTVDRTYAGEN
RKNGPLQGEDKSPGAEDTGQRRRTSVVVEHPAVKSPTMPQCYSCRSFRLHHSPQEEVASE
GIYESMEVFFSTPPAEEPVYLQLQPSDHASPTTPTKPVPPPRPLSTLQARQKERRRTQPV
LAYVISPRGGRPPIRSHSSCERGSEVPPLRKTKTEDQKQDGKTEIKEDSERGDQEHVICD
KAGGSDHGAEGDYRGGELMQHVSPLPHRRCVSECVIRGEVKLWQHLGAVKQSGVLHTLTY
RERQRQECMFEVVTSEASYLRSLNVLRDHFLGSRELDDTLVIHDKKSLFSNILQVHEASQ
RFLQDLLARVDECVLISDVCDIIYHHAHTHFSVYIEYVRNQVYQEKTYSKLMQCNRVFHT
VMRRLEQSPLCNRLPFTSFMLLPFQRITRIKILIESILKNTVEGSEEETTACRALTTVNE
MIKEANTQVGQMKQMEELIHIATMLEFDKLKAIPLVSRTRCLEKQGELQELVKGGSMFSF
RFRFNPIYIFLFNDIVILTRRSSVNADRFLVLDHAHRSLVQVQPIEGGTQIDHTFCLIML
ENHQGKMCERVLKANKESDLHRWMAAFPSVSMTKEEKVYDDWDCPQVQCIQQYVAKQADE
LSLEPSDIINIIRKTNEGWWEGIRLSDQTSGWFPHDVVIEVTNEHQRRRNLREQYRIAKA
ANHSTAT
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcccacgcccacacacacacacacacacacacacacacgcacgcacgcatacac
gcacatcatcatacacacaatccgtatcactcatacagtactcttcatcatgacaggagc
agcaaaactgagggaagtttcggaagcgatgtgaagttgttaaggttgaaaaatcccctg
tattccgggtgtgtgttttccctggtatgtggacctcatcaacaaaaacacataaacaca
cataaacacataataaacaaacaaggtttagattttgacaaacagatggccgctctgaga
cctcgcctcactcacaaaccaaacctgccccctaaaccaaagccacacacaccaaacact
agcaccacacacacaacggcagcgaccagaggagacgcacaggacatacacacatcctca
ttaacaacaacagaggactttcagcagacaggccacacccactcttcccgagagaaagag
gagagacaaaagagagagtggagaacagagctgcagatggatgcgggacgatcagagcca
gacggcagtgagacagacgagggtgttaaagcagagctgagtgtgaagagctcgatgatg
ccccctcatcacctggatgagaaacactgccactgtatctgtcacctatcccggccaggc
atgaagctgatgtgggttcctatggaggacacggtggacagaacatatgcaggagaaaac
agaaaaaatggccctctacagggggaggacaaatctccaggcgcggaggacacgggccag
agacggaggacgagcgttgtagtagaacaccctgctgtgaaatctcccacaatgcctcag
tgctacagctgccgcagtttccgcctccatcacagcccacaggaggaggtggcaagtgag
ggcatatatgagagcatggaggtgttcttctctacaccacctgctgaggaacctgtatat
ctacaactccaaccatctgatcacgcctccccaaccactcccaccaaaccagtaccccca
ccccgcccactctccaccctgcaggcccgtcagaaagagaggaggagaacgcagcctgtt
ctagcctatgtaatctcaccgagaggaggccgtccaccaatcagatctcatagcagctgt
gaaagaggaagtgaagtcccgcctctaagaaaaacgaagacagaggaccagaaacaagac
ggaaaaacagaaataaaagaagactctgagagaggtgaccaggagcacgtgatctgtgac
aaggctggtggcagtgatcatggtgcagaaggtgattatagaggaggagagctgatgcag
cacgtgagccccctcccccacaggaggtgtgtgagtgagtgtgtgatccggggagaggtc
aaattgtggcagcatctcggagcagtgaagcaaagcggagtcttacacacactcacctac
agagagagacagagacaggagtgtatgtttgaggttgtgacctcagaggcatcgtaccta
cgctcgctgaacgtgctcagagatcacttcctcgggtcacgggagctggacgacacactc
gtcatccatgacaagaagtcactcttctccaatatcctgcaggtgcatgaggccagccaa
aggttcctgcaggatctgctggctcgagtagatgagtgtgtgctcatctctgatgtgtgt
gacatcatctaccaccacgcacacacacacttctctgtgtacattgagtacgtcaggaac
caggtgtatcaggagaagacctacagcaagctaatgcagtgtaaccgtgtgttccacaca
gtaatgaggcgtttagaacaatctcctctctgtaatcggttgccatttacctccttcatg
ctgctgccattccagaggatcacacgcatcaagatcctgatagagagtattctcaagaac
acagtggagggttcagaagaggaaaccacagcctgtagagctctaactacagtgaatgag
atgatcaaagaggcaaacactcaggtgggccagatgaagcagatggaggagctcatacac
atcgccactatgctggagttcgacaaactcaaggcgatccctctggtgtctcggacacgg
tgtttggagaaacagggagagctacaggagcttgttaaaggaggatcaatgttcagtttc
cgctttcgtttcaaccccatctacatcttcctcttcaatgacatcgtcatcctcacccga
aggagcagtgtaaatgccgatcgcttcctggttcttgaccacgcccaccgctctctggtt
caggtccagcccatagagggaggaactcagatagaccacaccttctgtctaataatgctg
gagaatcaccagggcaagatgtgtgagcgtgtactaaaggctaacaaggagtcagacctg
caccggtggatggcagcatttccatctgtctctatgacgaaggaagagaaagtgtatgat
gactgggactgcccccaggtccagtgcatccagcagtatgttgcaaaacaggctgatgag
ctcagcttagaaccctctgacattatcaacattatacgcaaaacaaatgaaggttggtgg
gaggggattcgactctcggatcagacgtctggatggtttcctcacgatgttgtgatcgag
gtcaccaacgagcaccagcgccgccgcaacctccgagaacaataccgaatcgccaaggca
gccaatcacagcactgcaacctga
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