Ictalurus punctatus (channel catfish): 108260159
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Entry
108260159 CDS
T04658
Symbol
gtf3aa
Name
(RefSeq) general transcription factor IIIAa isoform X1
KO
K09191
general transcription factor IIIA
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108260159 (gtf3aa)
03021 Transcription machinery [BR:
ipu03021
]
108260159 (gtf3aa)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108260159 (gtf3aa)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
108260159 (gtf3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
DUF7565
zf_Hakai
zf-C2H2_8
IBR
XPA_N
Motif
Other DBs
NCBI-GeneID:
108260159
NCBI-ProteinID:
XP_017315712
Ensembl:
ENSIPUG00000020752
UniProt:
A0A2D0QBP5
LinkDB
All DBs
Position
28:complement(19250616..19257528)
Genome browser
AA seq
358 aa
AA seq
DB search
MFIMREFNKSFPRMFICSFPDCTAAYDKEWKLEAHLCKHTGVRPFGCEYAGCGKSFCSKS
HLARHELTHTGEKPFSCGEDGCTQSFTTNFNLKKHISRKHKQEAKMYTCVFEGCGKSFKK
NNLLKIHESTHTLQLPYECTYEGCDRRFANPSKRKRHEKVHKGYPCPAEDCSFVAKTWTE
LTKHRKEHKVRVQCEECKKTFRDQWFLKQHQHVHAEVRLVFLCPRDGCKRSYTTAFNLQS
HILSFHEQQRAFSCPEPGCTKAFSMKLSLQRHSVVHDPERKKQKKPRPTRSLASHLSGYK
TSKKRRKTPDLDDSPDSVTSQSETSKSDSNRAVISSEPVKDDVTWPCPMVLESSDQSQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcatgagggaatttaataaatcatttcccaggatgtttatctgctcttttccc
gactgcacggcagcgtacgataaagagtggaagcttgaggcgcatctgtgtaaacatacc
ggagtgaggccgttcgggtgcgagtacgccggatgcggcaagtcgttctgcagcaaatct
catctcgctcgtcatgagctcacgcacaccggagagaaacccttcagctgcggtgaggac
gggtgcacgcaaagtttcaccacaaacttcaacttgaagaagcacatttcacgcaagcac
aagcaggaagccaagatgtacacctgtgtgtttgaggggtgtggcaaaagcttcaagaag
aacaacctgctgaagattcacgaaagcacacacacactccagctcccgtacgaatgcacg
tacgagggctgcgacagacgcttcgcgaatcccagcaaaagaaaacgtcatgagaaggtg
cataagggttacccgtgtccggccgaggattgctcattcgttgcgaagacctggactgaa
cttaccaagcacaggaaagagcataaagtgagagtgcagtgtgaagagtgtaagaagacg
ttcagggatcagtggttcctgaagcagcaccagcacgttcacgctgaagttcggctcgtg
tttctgtgtccgagagacggatgcaagcgttcctacaccaccgccttcaacctgcagagc
cacatcctgtccttccacgagcagcagcgagcgttcagctgccccgagcccggctgcacc
aaagctttctccatgaagctaagtttacagcgtcactctgtggttcacgaccccgagaga
aagaaacagaagaaaccccgtccgacacgatcactggcgtctcatctgagcggctacaaa
acgtcaaaaaaacgccggaaaaccccggacctcgacgactctcctgactctgtgaccagc
caatcagaaacctccaaatcagacagcaatcgggccgttatctcgtcagaacccgtcaag
gatgacgtaacctggccatgtccgatggtgctggaatcgtccgatcagagccagtga
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integrated database retrieval system
