Ictalurus punctatus (channel catfish): 108260208
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Entry
108260208 CDS
T04658
Name
(RefSeq) zinc finger and BTB domain-containing protein 20
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108260208
04121 Ubiquitin system [BR:
ipu04121
]
108260208
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108260208
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108260208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2HC_2
BTB_KLHL33
Zf-C2H2_ZNF451_2nd
zf-C2H2_15
zf-met
zf-C2H2_6
BolA
Cadherin_tail
zf-Di19
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
108260208
NCBI-ProteinID:
XP_053533107
UniProt:
A0A9F7R488
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Position
28:complement(18975500..19078248)
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AA seq
666 aa
AA seq
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MTERVHNINLHNFSSSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAASPFFQDKL
LLGYSDIEVPAVVSVQSVQKLIDFMYSGALRVAHSEALQILTAASILQIKTVIDECTRIV
SHASAQETPRGTPDSGTSGPGSDAEQSLERAYSSVYPGLELQNGTRSERQHYTSVSIPGG
FDPLQQKEGVQDPSLWVSRLHERQQQSERFLGSSETTHCRKQPRPVRLHTAEHDVRIKQE
RTTEETYGCYGLDVDDANGEPKGESFDSGVSSSVGTENDPSEQHFMPGFGRECEAEVGTP
VHIDVTDSSPEQSQEMGEDNNSGDGRDIVMDQPSLSNTVVPSSVAGGQLYIRPCDTIAAN
LRMPLTIASGTNSYLPTLFAPQPSANENKPFLFSLPQTVSAQQPQFVAVPPHSMTPFPSG
LSGVPTAGTQQQQPTATGVVQQGEKKPYACTLCCKTFTAKQNYVKHMFVHTGEKPHQCSI
CWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKK
FSHKTLLERHMALHSTAPGVTGVVTGVTGVVTGVTGVVTGVSGANPAGPTSIPVQMAVPE
PGPGVVALAMPVGGGGAGGGVSGTGVGVASEASCQEATTYMCSVCPVKFDQIEHFNDHMR
KHVSDG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcgcgtccacaacatcaacctacacaacttcagcagctcggtactggagacc
ctgaacgagcagcgcaaccgcgggcacttctgcgacgtgacggtgcgcatccacggcagc
atgctgcgcgcccaccgctgcgtgctcgccgccgccagccccttcttccaggacaagctg
ctgctgggctacagcgacatcgaggtgccggcggtggtctcggtgcagtcggtgcagaag
ctcatcgacttcatgtacagcggcgcgctgcgcgtggcccactcggaggcgctgcagatc
ctcacggccgccagcatcctgcagatcaagacggtcatcgacgagtgcacgcgcatcgtc
tcgcacgcctcggcccaggagacgccacgcggcacgcccgactcgggaacctcgggcccc
gggagcgacgcggagcaaagcctggagcgcgcctactcgtccgtctacccgggactggag
ctgcagaacggcacgcgaagcgaacgccagcactacaccagcgtttccatccccggcggc
ttcgaccccctgcagcagaaagaaggcgtgcaggacccgtcgctgtgggtgagccgactg
cacgagcgccagcagcagtcggagcgcttcctgggatcgtccgagaccacgcactgccgc
aagcagccgcgcccggtacgcctgcacacggccgagcacgacgtgcgcatcaaacaagag
aggacgaccgaagagacgtacggctgctacggattagacgtggacgacgccaacggagag
cccaaaggcgagagcttcgattcgggcgtcagctcctccgtcggtaccgagaacgacccg
tccgagcagcacttcatgcccgggttcgggcgcgagtgcgaggccgaggtcggcacgccg
gtgcacatcgacgtcaccgattcgtccccggagcagagccaggagatgggagaggacaac
aacagcggggacggaagagacatcgtaatggaccagccgtctctgtccaacaccgtcgtg
cccagttccgtggcgggggggcagctttacatccgcccgtgcgacaccatcgcggcgaac
ctgcgcatgccgctgacgatagccagcggcaccaactcgtacctgcccacgctgttcgcc
ccgcagccctcagccaacgagaacaagccgttcctcttcagcctgccgcagaccgtcagc
gcccagcagccccagttcgtggccgtgcctccccacagcatgacgcctttccccagcggc
ctgagcggagtgccaaccgccggcacgcagcagcagcagccgaccgccaccggagtggtg
cagcagggcgagaagaaaccgtacgcctgcaccctgtgctgcaaaaccttcactgccaaa
cagaactacgtcaaacacatgttcgtgcacaccggtgagaagccgcaccagtgcagcatc
tgctggcgctcgttctccctgaaggattacctgatcaagcacatggtgacccacacgggc
gtgcgcgcctaccagtgcagcatctgcaacaagcgcttcacgcagaagagctcgctcaac
gtgcacatgcgcctgcaccgcggcgagaagtcctacgagtgctacatctgcaagaagaag
ttctcccacaagaccctgctggagaggcacatggcgctgcacagcaccgcgcccggggtc
accggggtcgtcaccggggtcaccggggtcgtcaccggggtgaccggggtcgtcaccggg
gtctccggcgccaacccggcaggccccacttccatcccggtgcagatggccgtccccgaa
cccggcccgggagtcgtggctctggccatgccggtgggaggaggcggagccgggggagga
gtcagcggaaccggagtgggcgtggcctccgaggcgagctgccaggaagcgacgacctac
atgtgctctgtgtgcccggtcaagttcgaccaaatcgagcacttcaacgaccacatgcgt
aagcacgtctccgacggataa
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