Ictalurus punctatus (channel catfish): 108260223
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Entry
108260223 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108260223
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108260223
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108260223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_2
TRAF3_RING
zf-Nse
Baculo_IE-1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108260223
NCBI-ProteinID:
XP_017315796
Ensembl:
ENSIPUG00000018604
UniProt:
W5UMT0
LinkDB
All DBs
Position
28:complement(16600014..16607449)
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AA seq
267 aa
AA seq
DB search
MENPDCPDANPSIPDEHSLIEGVSDPVLFVVILCVTFLAGLATLLCRNEQQRIHPENQEH
VRAVRQQLQTEQEAASPTPRHQFYSDMSCPVCLQQAVLPVETNCGHLFCGSCIIAYWRYG
TWLGAISCPICRQIVTLLFPLFRGTEQSAQTQDGQPDANLILNDVNDYNRRFSGQPRSLL
DRLRDVPTLLRHAFREMFSVGGLFWMFRIRILLCLVGALTYLVSPLDFIPEALFGLLGFM
DDLFVILLLFIYISIMYREVVTQRLVG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccccgactgtccggatgcaaatccttccatcccagatgagcactcccttatt
gaaggtgtcagtgacccagtgctgtttgtggtcatcctgtgtgtgacgttcctggctggt
ctggccacactgctgtgcaggaatgagcagcagaggatccacccggagaatcaggagcac
gtgcgagcagttcgccagcagctacagacagagcaggaagcagcatcgccgacgccgagg
catcagttctactcagacatgtcctgcccagtatgtctccagcaggccgttctccccgta
gagactaactgtggtcatctcttctgtggttcctgtattattgcgtactggcgctacggc
acatggctaggagccataagctgtcccatctgcagacaaatagtgaccctgctgttcccg
cttttccgtggcacggagcagagcgcccagacgcaagacggacagccggacgccaacctc
atcctcaacgacgtcaacgattacaaccgtagattctcaggacagcccagatctctcctg
gaccgtttgcgtgacgtccccactctcctccgccacgccttcagggagatgttttcggtc
ggaggactcttctggatgttccggatccggatcctgctgtgcctggtgggggcgctgacc
tacctggtgtctccgctcgacttcatccccgaggccctgttcggtctgctcggcttcatg
gacgacctcttcgtcatcctcctcctcttcatctacatctctatcatgtacagggaggtg
gtgacgcagaggctagtcggctga
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