Ictalurus punctatus (channel catfish): 108260227
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Entry
108260227 CDS
T04658
Name
(RefSeq) endoplasmic reticulum chaperone BiP
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03060
Protein export
ipu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
108260227
04141 Protein processing in endoplasmic reticulum
108260227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108260227
04131 Membrane trafficking [BR:
ipu04131
]
108260227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108260227
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
108260227
Chaperones and folding catalysts [BR:
ipu03110
]
Heat shock proteins
HSP70 / DNAK
108260227
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
108260227
Autophagy
ER-phagy
ER stress-related proteins
108260227
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108260227
Exosomal proteins of other body fluids (saliva and urine)
108260227
Exosomal proteins of colorectal cancer cells
108260227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FtsA
Radial_spoke_3
CC_BshC
FGGY_C
Tombus_movement
Motif
Other DBs
NCBI-GeneID:
108260227
NCBI-ProteinID:
XP_017315801
Ensembl:
ENSIPUG00000019695
UniProt:
W5UQA0
LinkDB
All DBs
Position
28:17411999..17416034
Genome browser
AA seq
652 aa
AA seq
DB search
MRLLGLCILVVGCVYADDDDKKENVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRIT
PSYVAFTSEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWGDSSVQQDIKYFPFKVLEK
KSKPHIQVEIGAGQLKTFAPEEISAMVLTKMKETAEAYLGKTVTHAVVTVPAYFNDAQRQ
ATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVF
EVVATNGDTHLGGEDFDQRVMDHFIKLYKKKTGKDVRKDSRAVQKLRREVEKAKRALSSQ
HQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSEIHEIVLV
GGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGEEDTGNIVLLDVCPL
TLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTF
DLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEDIERMV
NDAERFADEDKKLKERIDARNELESYAYSLKNQVGDKEKLGGKLSSEDKETIEKTVEEKI
EWLESHQDADIEDFQAKKKELEEIVQPIISKLYGSAGGPPPEEGGDDEKDEL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaggttactggggctgtgcatactggtggtcggctgtgtgtacgccgacgatgatgac
aagaaggaaaatgtcggcactgtagtgggcattgacctgggcactacgtactcctgtgtc
ggagtgttcaagaatggccgtgtcgagatcatcgccaacgaccagggtaaccgcatcact
ccgtcctacgtggccttcactagcgagggtgagcgtctgattggagatgctgccaagaat
cagctcacctccaacccagagaacactgtcttcgatgccaagaggttgatcggtcgtacg
tggggtgactcctctgtgcagcaggacatcaaatactttcctttcaaggttcttgagaag
aagtccaagccccatattcaggtggagattggagctggtcagttgaagaccttcgcccct
gaggagatctccgccatggtgcttactaagatgaaggaaactgcggaggcttacctggga
aagacggttacacatgccgtggtcaccgtccccgcttacttcaacgatgctcagcgccag
gctaccaaggacgccggtaccatcgctggcctgaacgtgatgagaatcatcaatgagcca
actgcagctgccatcgcttacggcctggacaagaaggacggtgagaagaacatcctggtg
tttgaccttggcggtggtactttcgacgtgtccctgctgaccatcgataacggcgtcttc
gaagtggtggctaccaacggagacactcacctcggcggcgaagacttcgaccagcgtgtc
atggatcacttcatcaagctgtacaagaagaagacgggaaaagacgtgcgcaaagacagt
cgcgccgtccagaagctgcgccgtgaggtcgagaaggccaagagagcgctgtcgtctcag
caccaggcccggatcgagatcgagtcgttcttcgagggcgaggacttctcggagactctc
acccgtgccaagtttgaggagctcaacatggatctcttccgctccaccatgaaacccgtg
cagaaagttctggaagactcggacctgaagaagtctgaaatccatgagattgtcctagtg
ggcgggtccactcgtatccccaagatccagcagctggtgaaggagttcttcaacggcaaa
gagccgtccagaggcatcaaccctgacgaggccgtggcttacggagctgctgtgcaggct
ggagtgctgtccggagaggaagatacaggaaacatcgtgcttttggacgtgtgccctctg
actcttggtattgagactgttggaggagtgatgaccaaactcatccccaggaataccgtc
gtccctaccaagaagtctcagatcttctctacagcttctgacaaccagccgactgtcaca
atcaaagtttatgaaggtgagcgtcctctgaccaaagacaaccacctcctgggcaccttt
gacctgacgggaatccctccagcaccccgcggtgttcctcagatcgaagtcacgtttgaa
atcgacgtcaacggcatcctaagggtcacggctgaagacaagggcacgggcaacaagaac
aagatcacgatcaccaacgaccagaaccggttgacgcccgaagacatcgagcgcatggtg
aacgacgccgagcgcttcgccgacgaagacaagaagctgaaagagcgcatcgatgcccgc
aacgagctcgagagctatgcctactcgctcaagaaccaggtaggagacaaggagaagctg
ggaggcaagctgtcttccgaagacaaggagaccatcgaaaaaaccgtggaggaaaagatc
gaatggctagagtcccaccaggatgccgacatagaagacttccaggccaagaagaaggag
ctggaagaaatcgtccagccgatcatcagcaagctgtacggtagtgcaggcggtccacca
ccagaagagggcggcgatgacgagaaggacgagttgtag
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