Ictalurus punctatus (channel catfish): 108260234
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Entry
108260234 CDS
T04658
Symbol
pdzd3b
Name
(RefSeq) NHERF family PDZ scaffold protein 4b
KO
K24059
PDZ domain-containing protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108260234 (pdzd3b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
108260234 (pdzd3b)
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Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108260234
NCBI-ProteinID:
XP_017315812
Ensembl:
ENSIPUG00000008678
UniProt:
W5UKE0
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Position
28:complement(10458372..10469829)
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AA seq
517 aa
AA seq
DB search
MELTEFVFNPKEGVDNPAMVISEDVVKFTGPLPRVCVLKREEGENFGFHLRLEKGRPGHV
IRQVELHGVAERSGLRDGDRLLEVNEQFVDDIEHMEVARRIQMSGPQLCLLLLSSDEYEQ
AVAQGWNLKELCKAQRGEEWNPPRFCHIIRNPVSGLGLSIHPVEGEKGKFSISPITGSPA
EKAGLRKGDLLVWINGAMACELTHSAINKMVKKCSDHMTVLVIDSKSEKNYISRKMAILP
AMADAQSMPYKPKRVHLVQGPDGYGFLLRHEKISTGRKVHMVREVDAGSPAEVGDIKDGE
ILMEVNGESVAHLSHEEVVSKVRESGQQVSFTTMTIEGQDFYTKLGLSPLLFCEDHSSGK
EQQGKSTPQEQSPTVLKWSVSSVEAQEELEVEPKPRLCVLQRSPIGFGFHLGWVQQKPGT
FINQVAPGGPGESSGLLQGDVLVEVNGQNVEEECLEDVILLMKKGGSSLSMLVMDRPGYD
WMKKTGKPITSQKVAKASEEVQDHESSSATQQSDPDE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggagttgacagaatttgtcttcaatccgaaggaaggagtagacaatccagccatggtc
atttctgaagatgtggtgaagtttactggccccttgccccgggtatgtgtgctgaaaaga
gaagagggagagaatttcggcttccatctgcgcttggagaaaggacgaccaggtcatgtg
atccggcaggtggaattacatggggtggccgagaggagtggattgagggacggggatcgt
ctcctggaggttaatgaacagtttgtggacgacatcgaacatatggaggttgcccgcagg
atccagatgagtgggcctcagctgtgcctcctgctgttgagtagtgatgaatacgagcag
gctgtggctcagggctggaacctgaaggaactgtgcaaagctcagcgcggtgaggagtgg
aatcctcctcgtttctgccatatcataagaaacccagtgagtggcctgggcttgagcatc
catccagtggagggtgagaaagggaagttctctataagtccaataacaggaagccctgct
gagaaggcaggactgagaaaaggagacctgctggtttggatcaatggtgccatggcttgt
gaactcactcattctgctattaacaagatggtgaagaaatgcagtgatcacatgactgtc
ctggtgatagacagcaagagtgagaagaactacatcagtagaaagatggccattctgcca
gccatggctgatgcccagagcatgccatacaaacccaaaagagtacacctggtacagggg
ccagatggctatggtttcctgcttaggcatgaaaaaatatcaacaggacgcaaagttcat
atggtgcgggaggttgatgcaggcagtcctgcagaagtgggagatattaaggatggggag
atcctgatggaggtgaatggggagtctgttgctcatctgtctcatgaggaagttgtcagc
aaagtcagagagagtggacagcaagtcagcttcaccactatgaccatagaaggccaagat
ttctacactaagctgggtctgtctcccctgctgttctgtgaagatcattcctctgggaag
gagcagcaggggaagtcgactccacaggaacagagtccaacagttctgaagtggtcagtg
tcctcagttgaagcccaggaggagctggaagttgagcccaaaccaagactgtgtgtacta
cagagaagccctattggattcggcttccatttgggttgggtccaacagaaacctggcaca
tttatcaaccaggtggcacctggaggcccaggagaaagttctggcctcctgcagggtgat
gtactggtggaggtgaatggacagaatgtagaggaggagtgtttagaagatgtgatttta
ctcatgaagaaaggaggcagctctctctccatgttagtgatggacagaccaggttatgac
tggatgaaaaagactggaaagcccatcacctctcaaaaagtagcaaaggcctctgaggag
gtgcaggaccatgagagctcatcagccacacagcagtctgatcccgacgagtaa
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