Ictalurus punctatus (channel catfish): 108260261
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Entry
108260261 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108260261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108260261
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108260261
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108260261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
pAdhesive_17
Motif
Other DBs
NCBI-GeneID:
108260261
NCBI-ProteinID:
XP_017315868
Ensembl:
ENSIPUG00000012016
UniProt:
A0A2D0QB05
LinkDB
All DBs
Position
28:complement(13114786..13227995)
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AA seq
800 aa
AA seq
DB search
MRLAAQRLAGLWPWLITAALQVALGHAGLEVSATRALIKVTLLNPKAPGPITLEGVFAGS
SSGFAEGKLMQSHPLSLCNTSEDERQENAFISIVKLESPESKVPQCLPLLEKARLALNRG
AQAVIFDITDDVSAAIELNSGFLKKPVVMVKAADAEELMGLVNKNEEANVEINIMMETPK
WPHYEVGILLTVVLVVLAIIMIFAFRSRCRSNRTWDSVHQQTMRAISRLETRTYSSQGCS
GGSHHPHSGRGSNSSSSSGPMCAICLEDFLDGQDLRIISCAHEFHKECVDPWLLQHRTCP
LCMHNIMAGAEPSGRQPQRLRGHPPPEHSQAFLYPHSQHYPASHSFPQPPIPFSLRPHYP
HTLSGPYPQLGAYSGSPPYHTRLLSTSCSYHLAPDGHRARPRHNCRNVGHHYTSSRRPCH
HCHANRMRHQNHHQNQRHGGSQGRQDEGSCSGASYGTERSGYFPDGPGSDSSSGPCHGSS
SDSVLNCTDVSLQGVYGSCSTFRSSLSSEYDPFVYHNAGAEGPTGSTRPRSLDSGVNQTS
GGLGFEEPQQQQAVFSHVHYHRHRHHYYEEGEPNQGPGRGSDEEQGTSGVAAGNSSMSKD
STLCQGAHVACHCPKTDPIDRCGPPGGVEDRDAAPPSPTSSLPGTSVLIPAPACCHPGHP
HCQKPTSCSLEASAPPMPAVHFHQRVDLQDDCSIHIHYGQSPAGYCCPPPLGAASTLLPV
PVILDSGGLAEWPCCRGARRGWQKQVQQAHSEPQLMGTGTLLDAPLCRGHHSAGHELPTE
ICLYCQSVRNNQGSEEESGV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgccgcacagcgcctggccgggctctggccgtggctgatcacggctgccctg
caggtggcgctgggccatgcgggcctggaggtgtcagcgacccgcgccctcatcaaggtc
acgctgctcaaccccaaagccccagggcccatcaccctggaaggggtgtttgctggaagc
agcagcggattcgctgaggggaaactcatgcagtctcacccgctgtctctgtgtaacacc
agtgaggatgagcggcaagaaaatgccttcatcagcattgttaagctggagagtccagag
agcaaagtgccacagtgcctgccacttctggagaaggcccggctggctctaaacagagga
gctcaggctgtcatttttgacatcactgatgatgttagcgctgctattgagttgaattct
ggcttcctgaagaagccggtggtgatggtgaaggcagcggatgctgaggagctgatggga
ctggtcaataagaacgaggaggccaatgttgagatcaacatcatgatggagacaccaaaa
tggccccattatgaagtgggaatcctcttgacagtcgtgttggttgtgctggcaatcatt
atgatctttgcctttcgttctcgctgcaggtccaaccgaacttgggactcggtccaccag
cagaccatgcgggccattagcaggctggagacccgtacctacagctctcagggctgctca
ggaggatctcatcatccacatagtggccgagggtcaaacagcagctccagctctggccct
atgtgtgccatctgccttgaggactttctggatggacaggatctgaggatcatctcatgt
gcgcatgagttccataaggaatgtgtggacccttggctgcttcaacaccggacctgtcca
ctctgcatgcacaacataatggcaggtgcagagccgagtggtcgtcagcctcagcgactt
cgtggacatccacccccagagcacagccaggcttttctttacccccactcacagcattac
ccagcttctcactcttttccccagccccccattcccttctccctacgaccccattacccc
cataccctctcgggaccctatccccagctgggagcctatagtggctcccctccctaccac
actcgcttattgagcaccagctgcagctatcatcttgcccctgatgggcaccgtgcccga
cctcgccacaactgccggaacgtcgggcaccactacacatcttcgcggcgtccgtgccac
cactgccatgccaaccggatgcggcatcagaatcatcaccaaaaccagcgccacggaggc
tctcaggggcgccaggatgagggcagctgctcaggggccagctatggcacggaacgcagt
ggctacttccctgatggacctggcagtgactcaagctcgggcccatgccacggctcatcc
agtgactcagtgctcaactgcaccgatgtaagcctgcaaggtgtctacggcagctgctct
acctttcgtagttcgctcagcagtgagtatgacccatttgtctaccacaatgctggtgct
gaaggtccgacaggtagcaccaggccccgatctctagattcaggagttaatcagactagt
ggaggacttgggtttgaagaaccacagcagcaacaggctgtattcagccatgtgcactac
catagacacagacaccactattacgaagagggcgagcccaaccaaggaccaggaagaggc
tctgatgaggagcaagggacatcaggagtagcagcaggcaattcatccatgagtaaggac
tcaactttgtgtcagggggcacatgttgcctgccattgccccaaaacggaccctatagac
aggtgtggacctcctggtggagtggaggatcgggatgcagctcctccatcccccacttcc
tccttgcctggcacctcagtgctgatacctgcaccagcctgctgccacccagggcaccca
cactgccaaaaacccaccagctgcagtctggaagcttctgccccacccatgccagctgtg
cacttccatcagagagtggatctacaggacgattgcagcatccacatccactatgggcaa
agtcccgcaggttactgctgcccccctcctctgggtgcagcctccacactgctgcctgta
cctgtaatcctggactcaggtgggctggcagagtggccctgctgcaggggggcacgaagg
gggtggcaaaagcaggtgcaacaggctcactctgagccacagctaatggggacaggcact
ctattggacgcacctctgtgcagagggcatcacagtgccgggcatgaactgcccacagaa
atctgtctctactgccaaagtgtacgcaataatcagggatcagaggaagagtctggtgtt
tga
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