Ictalurus punctatus (channel catfish): 108260301
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Entry
108260301 CDS
T04658
Symbol
dtx2
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108260301 (dtx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108260301 (dtx2)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108260301 (dtx2)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108260301 (dtx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
WWE_5
Motif
Other DBs
NCBI-GeneID:
108260301
NCBI-ProteinID:
XP_017315951
Ensembl:
ENSIPUG00000023083
UniProt:
A0A2D0QE00
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All DBs
Position
28:4149704..4161654
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AA seq
586 aa
AA seq
DB search
MATASGFSSGVSGSRSGASLTASSSGAGGQAQGMVAVWEWQDDAGSWRPYSGQVSCFIEQ
CLQHHRSAGPTVTTISLGQSDPSLAAYIIDIPSLKQFRQDTGKIRSVRRSIFPQSSALGS
GVLWEWANDEGGWTAYEMHVSGLLEHSYLAHQTTADLGPHGHNYVVDFTSLEQVNKSSGY
RRRVRRQTGPPYPPAAASGTGSVIHSGPACTCQQCLSHGPMPGRSRHSFSAGAGPSSAYS
PYPRRPLSVGNMAWGGPWSPAATSMAQPPGPVPSFPSTPNGSSIPSIPLQLNGSSSVSAA
LAGMASILMSAAGLGVRFMTSPSGRPNQAQASSVKRAKRQHRTAAQKPEDVIKKYMEEMR
VIPDEDCMICMERLSCPSGYDSPEGCGQALQPGTVGKFTKCGHTLHMLCMLAMYNNGNKD
GSLQCPSCKTIYGEKTGTQPKGKMEIYSIPQSLPGHPDCSTIQIIYNIPPGMQGPEHPNP
GQPYTCRGFPRFGFLPDNDKGRKVLELLKVAWMRRLIFTVGTSSTTGEPDTVVWNEIHHK
TEMMSNVSGHGYPDPNYLDNVLAELAAQGVTEDCLKRDTPRSREPE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcttccggtttctcttctggcgtgagcggctcgcggagcggcgcgtctctg
actgcgtcctcgtccggagcgggcggccaggcgcagggcatggtggcggtgtgggagtgg
caggatgatgcgggatcgtggcggccctacagcggccaggtgagctgcttcatagagcag
tgtctccagcatcatcggagcgcaggcccgactgtcaccaccatctccctggggcagagt
gacccgagcctggccgcctacatcatcgacatcccgagtctcaagcagttccgacaggac
accggtaagatccgctcggtgcgacgcagcatcttccctcagtcgtctgcactgggcagc
ggcgtgctctgggaatgggccaacgacgagggcggctggacggcatacgaaatgcacgtc
tctggtttgctggagcacagttacctggcacaccagaccacggctgacttgggaccacat
ggccataactacgtggtggacttcacatcgctcgaacaggttaacaagagctccggctat
cggcggcgcgtgcgcaggcagaccggccctccgtaccctcccgcggcagcctcgggcacg
ggctcggtaatccactcaggcccagcgtgcacgtgccagcagtgtttgagccacggaccc
atgcccggccgctcgcgccactctttctcggctggagccggcccgtcctcggcatactct
ccgtatcccagaaggccgctctctgtagggaacatggcttggggaggaccctggagccca
gcagctacgtctatggctcagcctccagggccggtgccgtcctttccgagtactcccaac
ggctcgagcattccatctattcccttacagctgaacggctccagcagcgtgagtgcagcc
ctggcaggcatggcttccattttgatgtcagcagcaggactgggagttcgcttcatgacc
agcccgtccggcaggcccaaccaagcccaggccagctccgttaagagggcaaagagacag
cacaggacagctgcccagaaacctgaagacgtcattaagaagtacatggaggaaatgcgc
gtgatccccgacgaggactgcatgatttgcatggagcgtctgtcgtgtccgtccggctac
gacagccctgaaggttgcggccaggccctgcagcccggcacggtgggcaaattcaccaag
tgtggacacaccttgcacatgctctgcatgctggccatgtacaacaacggcaacaaggac
ggcagcctgcagtgcccctcttgcaagacaatctatggggaaaagacgggcactcaacca
aagggcaagatggaaatatacagcatccctcaatccctcccgggccaccccgactgcagc
actatacagatcatctacaacatcccacctggaatgcagggtcccgagcaccccaatccc
ggccagccgtacacctgtcgaggttttccacgcttcggcttcctgcctgacaacgacaag
ggcagaaaggttctggagctgctaaaggtggcgtggatgcggcggttgatcttcacggta
ggcacttccagcacgacaggcgagcctgacacggtggtgtggaacgagatccaccacaag
accgagatgatgtcgaacgtatcgggccacggctacccggaccccaactatctggacaac
gtgctggcagagctggcggcgcagggcgtaaccgaggactgcctgaaaagagacacgcct
cggtcacgtgagcccgagtag
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