Ictalurus punctatus (channel catfish): 108260354
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Entry
108260354 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108260354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108260354
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108260354
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108260354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
zf-RING_4
Baculo_IE-1
Haem_bd
Motif
Other DBs
NCBI-GeneID:
108260354
NCBI-ProteinID:
XP_017316079
Ensembl:
ENSIPUG00000020093
UniProt:
A0A2D0QCQ9
LinkDB
All DBs
Position
28:17855738..17860572
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AA seq
674 aa
AA seq
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MAATSCLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSTACLMCTSCKNRLPRQYCCDCSVVLCDA
CKVEGHQHQGHTVQTIRAAAEQRRKDLGGRLVNLRDSMANIQKKKAAIDGVSKSLRLKYK
AVQQEYARAELQLQEELGRSRRAFAASLAEVEKLNSQILEEQTYLLNIAEVQVVSRCDYL
TMRIKQTDTALLEESGGNDEEELDVKSSLPVLLKLQEPELVKTENPQSLDVGQLTTKQCT
INTDEEDGQELAAAAAAAAAAAAVTATTAPVDMYRDVDMTSTVEEAVCASPGSFKSKSVD
EGGRVTEGASGGQLCQFVKKMGCKGNLPGMFNLPVSICVTPHGDVLVADRGNYRIQIFNR
KGFQREIRRNPSSIDNFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGH
CIACHKNQLIKPWGIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVT
CDSAGTVYFTQGLGLNIENRHNEHHLEGGFSIGSVGTDGQLGKQLSHFFSETEDFRCITG
MCVDANGDLLVTDSGRKEILQFPKEGGYNILIQEGLTCPVGVAVTHKGQLLVLDCWDHCV
KVYTYLQRRRSSTC
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacgtcatgtctggatccagacctggtgcgagaggtgctggagtgccccatc
tgcctggaaacctacaatcaggaccagctccgtcccaaactgctccagtgtggccactct
gtgtgccggcaatgcctggagaagctcctggcgagcacgattaatggcgtgcgatgcccg
ttttgcagtaaggtctcccgcatgagcagcatctcgcagctggctgacaatctcacggtg
ctgaagatcatcgactgcgcgagctcatgcggctcgacggcctgcctgatgtgcacgtcc
tgcaagaaccggcttccgcgtcagtactgctgcgactgctctgtggtgctctgcgacgcc
tgcaaggtggaaggtcaccagcatcaagggcacactgtgcagaccatccgtgccgccgcc
gaacagcgccggaaagacctcggtggaaggttggtgaatcttcgagattccatggctaat
attcagaagaagaaagcggctatcgatggcgtttccaaatccttacgtctgaagtacaaa
gcggtgcagcaggagtacgcgagggctgagctgcagctgcaggaagagctcgggcggtcg
cgtagagccttcgcggcatccctggcagaggtcgagaagctcaattctcagatcctagaa
gagcaaacgtaccttctgaacattgccgaggtacaggttgtgtctcggtgtgactacttg
accatgaggattaagcaaacagacaccgctctactagaagaatcgggtggtaacgacgaa
gaagagctggatgttaaaagcagtctgcccgtactcctaaagctgcaagaacctgagctg
gtcaaaacagagaacccgcagtcgttagatgtggggcagttgacgactaagcagtgtacc
attaacacggatgaggaagatggtcaagagttagccgccgccgccgctgctgccgctgcc
gctgctgccgtcacggccaccaccgcccctgtagatatgtatcgtgacgtcgatatgacg
agcaccgtagaggaagcggtgtgcgcctcaccaggtagcttcaaatccaaatccgtggat
gagggcggacgtgtgacagagggagcatctggaggtcagttatgtcagtttgtaaagaag
atggggtgcaaagggaacctcccgggtatgtttaacctgccagtgagcatctgcgtaact
ccgcacggcgatgttctggtggcagaccgcggcaactatcgtattcagatcttcaaccgt
aagggcttccagcgcgagatccgccgcaacccgagcagcatcgacaacttcgtcttgagc
ttcctaggcgccgaccttcccaatctcatccctctgtccatcgccatcaccgctcaggga
ctcatcggcgtcacggataactacgacaactccgtcaaggtttacacgacagacgggcac
tgcatcgcgtgccacaagaaccagctgatcaagccatgggggatagctgccatgccttct
gggcagtttgtcgtgtctgatgttgaaggaggcaagctctggtgcttggcggtggatcga
aacgtcggagtggtgaactacaacaggttgtgctcagccgtcaggcctaagttcgtgact
tgtgactctgcggggacggtctacttcacgcaagggttaggcctgaacatcgagaacagg
cataacgagcaccacctggaaggagggttctccatcgggtcggtcggcacggacggccag
ctcgggaaacagctcagccacttcttctccgaaacagaggatttccgatgcatcacggga
atgtgcgtggacgccaacggggacctgctggtgacggacagcggccgaaaggaaatcctg
cagttccccaaagaaggtggttataacattctgattcaggagggactgacgtgtcccgtc
ggagttgccgtgacacacaaaggacagcttctggttttagattgctgggaccactgtgtc
aaggtgtacacctatttacagaggcggcgctcgtcgacttgttaa
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