Ictalurus punctatus (channel catfish): 108260355
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Entry
108260355 CDS
T04658
Name
(RefSeq) POU domain, class 2, transcription factor 3
KO
K09364
POU domain transcription factor, class 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108260355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108260355
03021 Transcription machinery [BR:
ipu03021
]
108260355
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108260355
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
108260355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108260355
NCBI-ProteinID:
XP_017316080
Ensembl:
ENSIPUG00000022763
UniProt:
W5UR88
LinkDB
All DBs
Position
28:3785940..3796174
Genome browser
AA seq
398 aa
AA seq
DB search
MSTEAVEQRNPQHDHTEIEQNGIDFTRQIKTEDLNDSPHSASSHKTCHLTQGSPAPTGQL
PGELPSLHPLPQLVLMSGSHLSSSSPFLLSQAQSGHQALLQPNLLSLPSQTQPSLLQHQP
GLALTPQAMGRTGLAGSSMDAHLDMPHLQVPKHVGASQQDEPSDLEELEQFAKSFKQRRI
KLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSDS
MANPATLPPLMEGYGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEITMISEQLSMEKEV
VRVWFCNRRQKEKRIYCPVATSPIKSHNYNPRLPASGRPFSPLASGGVSSSSSPNSPTRG
SSPNTLSSSSSPLTSQGVNQSFNPTGSWYRWNSTAYHH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaggctgtcgaacagaggaatcctcagcatgatcacacagaaatcgaacaa
aatggcattgatttcacaagacagataaagacagaggacctgaacgattcccctcactcg
gcctcgtcgcataagacatgtcacctcacgcagggttcgccagctccaacagggcagctg
cctggggagttgccatcgctgcacccacttccccagctggtcctcatgtctggctcacac
ctttcctcatcttcgcctttcctcctctcccaggctcagagtggacaccaagcactactg
cagccaaatctcctgtccttgccctctcagacccagcctagtctcctgcagcaccagcct
ggactggccctcacgcctcaggcaatgggacgaacaggcttggctgggtcctccatggat
gcacacttggacatgcctcacttacaagtgcctaagcacgtgggtgcttcgcagcaagac
gagccaagtgacctggaggaactggagcagtttgccaagtctttcaaacaacggcgcatc
aagctgggcttcacacagggagatgtgggtttggctatggggaagctctatggaaatgat
ttcagtcaaaccacaatttcccgctttgaggctctcaatctcagtttcaagaacatgtgc
aagctcaaaccattgctggagaagtggctcagtgatgcagaaaactcaccctctgactcg
atggctaatcctgcaactttaccacctcttatggaaggatatgggaggaagaggaaaaag
aggacgagtattgagaccaacatcaagctcacactggagaaacgcttcttagataatccc
aaaccgaactctgaggagatcactatgatctcggagcagctgtcaatggaaaaggaagtg
gtgcgggtgtggttttgcaaccgacgacagaaggagaagaggatctattgtccagtcgcc
acctcgcctataaaatcgcacaactacaatcccagactgcctgcatctggcagaccattc
agtcctcttgcttcaggaggcgtgtcgagcagctcgtctcctaacagcccgactcgtggc
tcttctcccaacactctgtcttcgtcctccagtcctctgacatcacaaggggtcaatcaa
tccttcaatcccacaggatcctggtatcgttggaacagtactgcgtatcaccactga
DBGET
integrated database retrieval system
