Ictalurus punctatus (channel catfish): 108260372
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Entry
108260372 CDS
T04658
Name
(RefSeq) vacuolar protein sorting-associated protein 37D isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108260372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108260372
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108260372
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
108260372
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108260372
Exosomal proteins of colorectal cancer cells
108260372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mod_r
T4BSS_DotH_IcmK
ATR1_N
AAA_3
Motif
Other DBs
NCBI-GeneID:
108260372
NCBI-ProteinID:
XP_017316110
Ensembl:
ENSIPUG00000022978
UniProt:
A0A2D0QFG5
LinkDB
All DBs
Position
28:3992828..4020158
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AA seq
295 aa
AA seq
DB search
MSQKREVNSCPDGYRVLSTSELRELLQDEAKMDKIVRLSEKFQELQVEREAMLVINRSLA
EESLAHRPRLQNGKIQLAAKYEELAKLAASYREKQSRLETHIQKRGPQTAQNLLQDEVAR
AEDQSEELLKRFMEGQVPLEGFLDSFQSFRKTYHVRRAQVEKIQELNRPGRKQTKRSEED
EEEAEEQKKKDQGSKELRPNGITSHGSARIFQVRYGLTPAILVPLSTSSAPPTSLSPLDS
CPGQRQALGHGAPHPCPGQPVGLRVIGQLPGWPIRPVRLQQLYRPSPHQHEPPYR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagagggaagtgaactcttgcccggacgggtacagggtcctcagcacgagt
gaactacgggagcttcttcaagatgaagcaaaaatggacaagatcgtgcgcctcagtgaa
aagtttcaggagctgcaggtggagagggaagccatgctggtgattaatcgaagtctcgca
gaagaaagccttgcacatcggccccggctccagaacggtaaaattcaattggctgctaag
tacgaggaactcgcaaagctggccgcttcctacagggaaaagcaaagccgactcgagacc
cacatccagaagcgcggtccacagacggctcagaatctcctacaagatgaggtggcacgt
gccgaggatcaatctgaggagcttctgaagagattcatggagggccaagtcccgctggag
ggcttcctggactctttccagagcttcaggaagacgtatcacgtccgccgggcacaggtt
gagaagatccaggagctcaaccggccggggaggaagcagaccaagcgctcggaggaggat
gaggaggaggcggaagagcagaagaaaaaggatcaggggtcaaaggagctccggcccaac
ggcattacctcccacgggtcggcacgcatcttccaggtgcgttatggcctcacgccggcc
atcctggtacccctgtctacgtcctcggctccacccactagcttgtctcctctggactcg
tgcccaggacagcgccaggctttagggcacggtgcccctcatccgtgccctgggcaacct
gtgggcctcagagtgataggacagttaccaggctggccgatcagaccggtgcggttacag
cagctctataggcccagtccacatcagcatgaacctccatatcgataa
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