Ictalurus punctatus (channel catfish): 108260380
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Entry
108260380 CDS
T04658
Name
(RefSeq) 5-hydroxytryptamine receptor 3A
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108260380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108260380
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Serotonin (5-HT3)
108260380
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108260380
NCBI-ProteinID:
XP_017316131
UniProt:
A0A2D0QEH3
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Position
2:23702440..23709105
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AA seq
417 aa
AA seq
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MVSAKMIVKSLLVLYFVMASVESTKQCLSRRCLANDFIEKQLYSAPQPPDCFINVNLTTI
QYETLSFNLQNLQFSSHIKVNMEWTDPDLAWSDSQYNFTEVLLPFNYIWLPNLTVNNAIY
TAVEPLSRDILVASDGTVSYGIQMYVTVACDMNLFAYPFIEDTCEVAINGWNQSSCGVKL
KYGNIITVGGHQGEWQTKDVELCGEDTSYLHVTLYLNPFNALVSLVLPTALIMVVDLVSF
AIPLDGERNAFKIKLVFSFTMFLLILSKQLPEGGPCSPLIYYHFCFCLIVLVVSLLVSMM
LSQLARTGSIWPGRPRKSGSGVSVAQQDDAIHQNDTEINSIKANSVDLISDYTSIQKISS
FVNNMDKEVTEKKRRQDCAKSWDNLFFIIYLALDIIYMFCAFSFFKTQKCRTNKVNF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgctaagatgattgtgaaatctcttcttgtcctttattttgtgatggcatca
gtggaatccacaaagcaatgtttatcacgtcgatgtctggctaatgatttcattgaaaag
caactctatagtgctccacagcctccagattgttttataaatgtgaatctcacaaccatc
caatatgagactctctctttcaatttacaaaatttgcaattctctagtcacataaaggtc
aacatggaatggacagaccccgaccttgcatggtcagattcacaatacaattttaccgaa
gttttacttccatttaattatatctggctccctaatctgactgtgaacaatgccatttat
acggcagtggagcctctttctcgtgatatattagtggcaagtgatggcactgtgagctat
gggatacagatgtatgtaactgtggcgtgtgatatgaatctcttcgcttatcccttcatc
gaggatacatgcgaggtggccatcaatggatggaatcaaagctcttgtggagtgaagctc
aagtatgggaacataataacagttggaggtcatcaaggggaatggcaaactaaggacgtg
gaactctgcggtgaagacactagctaccttcatgtcactctgtacctcaacccctttaat
gcattggtgtcattggtactgcccactgcactcatcatggtggttgacctggtgagcttt
gctatacctctggatggtgaacgaaatgctttcaagatcaagttggtgttcagcttcacc
atgttcctccttatactttccaaacaactgcctgagggtggtccctgcagccctctgatc
tattatcacttttgcttctgcctgattgtgctggttgtgagtctgctggtatccatgatg
ttgtctcaactggctagaactggtagcatatggcctggcaggccacgaaagagtggatca
ggcgtctccgtggctcaacaggacgatgcaattcatcaaaatgacactgaaatcaacagc
atcaaagccaactctgtggatctgatatcggattatacatctatccagaagatttcaagc
tttgtgaataatatggacaaggaggtaacagagaaaaagaggagacaggactgtgcaaaa
tcttgggacaatctcttttttattatatatttggccttggatatcatttacatgttctgt
gcattttccttcttcaaaacacagaagtgtagaactaataaggtaaatttttaa
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