KEGG   Ictalurus punctatus (channel catfish): 108260436
Entry
108260436         CDS       T04658                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF185 isoform X1
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108260436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108260436
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108260436
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108260436
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-rbx1 RING_XB3-XBAT31 zf-ANAPC11 Prok-RING_4 Baculo_IE-1 zf-C3HC4_4 IBR_1 Rtf2 zf-UDP zf-RING_4
Other DBs
NCBI-GeneID: 108260436
NCBI-ProteinID: XP_017316229
Ensembl: ENSIPUG00000018828
UniProt: A0A2D0QD56
LinkDB
Position
28:17120489..17125361
AA seq 196 aa
MASASPPQPQPQSSGSSATDGTGTGSGTQTQGETGSQDSTFECNICLDTSKDAVISLCGH
LFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPRERTPPRPQGQRPE
PENRGGFQGFGFGDGGFQMSFGIGAFPFGIFATAFNINDGRPPPAAPGTPQHIDEQFLSR
LFLFVALVIMFWLLIA
NT seq 591 nt   +upstreamnt  +downstreamnt
atggccagcgcctctcctcctcaacctcagcctcagtcatcgggctcttcagctacagac
ggcacagggaccggctccggtacccaaacacagggagagaccggcagccaggacagcacg
ttcgagtgtaacatctgcttggacacgtccaaggacgccgtgataagcttatgcggccat
ctgttttgctggccatgcctgcatcagtggttggaaaccaggccgaacagacaggtgtgt
ccggtatgtaaagcaggcatcagcagagataaagtgattccgctgtatgggcgaggcagc
acgggtcagcaggaccccagagagagaactccacccagaccacaaggccagagacccgag
cctgaaaaccgtggcgggtttcaaggatttggttttggagatggtggcttccagatgtcc
ttcggtatcggagcgtttccttttgggatctttgccacagcattcaacatcaatgatgga
agaccacctccagcagctcccggaacgccacagcacatagacgagcagttcctgtcccgc
ctcttcctgtttgtggcgctcgtcatcatgttttggcttctcatcgcgtaa

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