KEGG   Ictalurus punctatus (channel catfish): 108260448
Entry
108260448         CDS       T04658                                 
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03030  DNA replication
ipu03082  ATP-dependent chromatin remodeling
ipu03410  Base excision repair
ipu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108260448
   03410 Base excision repair
    108260448
   03420 Nucleotide excision repair
    108260448
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108260448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ipu03032]
    108260448
   03036 Chromosome and associated proteins [BR:ipu03036]
    108260448
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108260448
Enzymes [BR:ipu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108260448
DNA replication proteins [BR:ipu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    108260448
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    108260448
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      108260448
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C BUD22 DUF4746 CIS_TMP PPP4R2 TAF Bromo_TP RNA_pol_3_Rpc31 DUF5427 CDC45 Myc_N PFF1_TM NOA36
Other DBs
NCBI-GeneID: 108260448
NCBI-ProteinID: XP_017316243
Ensembl: ENSIPUG00000007668
UniProt: A0A2D0QC36
LinkDB
Position
28:complement(9958580..9978664)
AA seq 149 aa
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANSFAMKAK
RKTLNASDVMSAMDEMEFERFLPPLREALEAYKKGQKGKKEASEQKRKDKEKKNGTEEND
KSREEEDEEEHTEDEQDGENEGEEEDVEN
NT seq 450 nt   +upstreamnt  +downstreamnt
atggcggagagaccggaggacctgaacctgcccaacgctgtcatcacccgcattatcaaa
gaggctttaccagacggtgtaaatgtgtcaaaagaggcgagaagagccatatctcaagca
gccagtgtgtttgttctgtacgcaacatcatgtgccaacagttttgccatgaaagccaaa
agaaagactctgaacgccagcgatgtgatgtctgctatggatgagatggagttcgagcgt
ttcttgccacctctgcgcgaggctcttgaggcctacaaaaagggccagaaggggaaaaaa
gaggcatcagaacagaaacgtaaggataaagagaagaagaatggcacggaggaaaatgac
aagagcagagaggaagaggatgaagaagaacacacagaagatgagcaggatggagagaac
gagggagaggaggaggacgtggagaactga

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