Ictalurus punctatus (channel catfish): 108260448
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Entry
108260448 CDS
T04658
Name
(RefSeq) DNA polymerase epsilon subunit 3
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03030
DNA replication
ipu03082
ATP-dependent chromatin remodeling
ipu03410
Base excision repair
ipu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108260448
03410 Base excision repair
108260448
03420 Nucleotide excision repair
108260448
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108260448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108260448
03036 Chromosome and associated proteins [BR:
ipu03036
]
108260448
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108260448
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108260448
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
108260448
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
108260448
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
108260448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
BUD22
DUF4746
CIS_TMP
PPP4R2
TAF
Bromo_TP
RNA_pol_3_Rpc31
DUF5427
CDC45
Myc_N
PFF1_TM
NOA36
Motif
Other DBs
NCBI-GeneID:
108260448
NCBI-ProteinID:
XP_017316243
Ensembl:
ENSIPUG00000007668
UniProt:
A0A2D0QC36
LinkDB
All DBs
Position
28:complement(9958580..9978664)
Genome browser
AA seq
149 aa
AA seq
DB search
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANSFAMKAK
RKTLNASDVMSAMDEMEFERFLPPLREALEAYKKGQKGKKEASEQKRKDKEKKNGTEEND
KSREEEDEEEHTEDEQDGENEGEEEDVEN
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagaccggaggacctgaacctgcccaacgctgtcatcacccgcattatcaaa
gaggctttaccagacggtgtaaatgtgtcaaaagaggcgagaagagccatatctcaagca
gccagtgtgtttgttctgtacgcaacatcatgtgccaacagttttgccatgaaagccaaa
agaaagactctgaacgccagcgatgtgatgtctgctatggatgagatggagttcgagcgt
ttcttgccacctctgcgcgaggctcttgaggcctacaaaaagggccagaaggggaaaaaa
gaggcatcagaacagaaacgtaaggataaagagaagaagaatggcacggaggaaaatgac
aagagcagagaggaagaggatgaagaagaacacacagaagatgagcaggatggagagaac
gagggagaggaggaggacgtggagaactga
DBGET
integrated database retrieval system