Ictalurus punctatus (channel catfish): 108260502
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Entry
108260502 CDS
T04658
Name
(RefSeq) alpha-1A adrenergic receptor isoform X1
KO
K04137
adrenergic receptor alpha-1D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04081
Hormone signaling
ipu04082
Neuroactive ligand signaling
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108260502
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108260502
04082 Neuroactive ligand signaling
108260502
04081 Hormone signaling
108260502
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108260502
04270 Vascular smooth muscle contraction
108260502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108260502
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Biogenic amine
Adrenaline
108260502
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
108260502
NCBI-ProteinID:
XP_017316345
Ensembl:
ENSIPUG00000015829
UniProt:
W5UI59
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Position
29:complement(14624121..14637388)
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AA seq
493 aa
AA seq
DB search
MTLSNLNQSHDARNLSLSEVSNSSGNATCAGTVLDAQVVAVGIFLAVFILAAIVGNILVI
LSVLCNRHLQTVTNFFIVNLAIADLLLSVVVLPFSASLEVFGCWVFGRVFCNIWAAVDVL
CCTASILSLCVISIDRYIGVKYCLKYPTIMTERKAGVILVLVWVSSVVISVGPLLGWKEP
PPSDESICSITEEPGYALFSSLFSFYLPLMVILVMYFRVYVVARRTTKSLEAGVKRERNK
SMEVVLRIHCRSSPEDAGAGSKSKNHPLRSSLSVRLMKFSREKKAAKTLAIVVGMFIVCW
LPFFFVLPLGSFFPALKPSDVVFKVIFWLGYFNSCINPVIYPCSSKEFQRAFTRLLRCQC
HHRRRSLRRFYDQRWRTALRGAARDSRGDYQPGFSFHDSCSSSIFSCRTKGGSLNLKSWS
LFPPLQKSSFHLKEKMNNLSNKIKSGAGKSSMPSLERTEIDTVAMGIYSECSEPSGYQIY
DLTECYGLKETDI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacattgtctaatctgaaccagagtcatgacgcgcgcaatctgtctctttccgaggtt
tctaacagcagcggaaacgcgacgtgcgccggaaccgtgctggacgcgcaggtcgtggcg
gtgggaatcttcctggctgtcttcatcctggctgcgatcgtcgggaacattttggtcatc
ctgtctgtcctgtgcaacagacacttacagactgtgaccaacttcttcatagtcaactta
gccatcgcggatttgctcctgagcgtcgtggtgttgccgttctccgcgtctctggaggtg
tttggatgttgggtgtttggacgcgtgttttgcaacatctgggctgctgtggacgtgctg
tgctgcaccgcgtccatcctcagcctgtgcgtcatctccatagaccgatacattggagtc
aagtactgcctcaaataccccacgatcatgaccgaacgcaaagccggggtcatcctggtg
ctggtctgggtctcctcggtggtcatctcggtggggccgcttttaggctggaaggaacct
ccgccgtcggatgagagcatctgcagcatcaccgaggaacccggttacgctctgttctcc
tcgctgttctccttctacctcccgctcatggtcatcctcgtcatgtactttcgggtgtac
gtcgtggcccggaggaccaccaagagcctggaagcaggagtgaagcgagaaaggaacaaa
tccatggaggtggtgctgcggatccactgccggagctctccggaggacgccggcgcgggg
tcgaaaagcaagaaccacccgctgcgcagctcgctctccgtgcgcctcatgaagttctcc
agagagaagaaagcagccaaaactctggccatcgtggtcgggatgttcatcgtgtgttgg
ctgccgtttttcttcgtcttgcctttaggttctttcttccctgctctgaaaccttccgac
gtggtgtttaaagtcatcttctggttggggtacttcaacagctgcatcaacccagtcatc
tacccctgctctagtaaagaattccagcgagctttcactcgccttcttcgctgccagtgc
catcaccgacgacgcagcttacgccgcttctacgaccagcgctggcgtacagccctcagg
ggggcagccagagactcacggggtgactatcagcccggtttctccttccatgattcctgc
agcagctcgatcttctcatgtcggaccaaaggcggctccctgaacctgaaaagctggagc
ctcttccctcccttgcagaagtcttccttccatctgaaggagaagatgaacaacttgtct
aacaagatcaagagcggcgcagggaagagttcaatgccctcgttggagaggaccgagatc
gatacggtggccatggggatctacagcgagtgcagcgagccaagcgggtatcagatatac
gatctgacggaatgttacggcttgaaggagacagatatctaa
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