Ictalurus punctatus (channel catfish): 108260510
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Entry
108260510 CDS
T04658
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108260510 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108260510 (cnga1a)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108260510 (cnga1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
ADI
NPR3
DUF3043
CLN3
FancD2
DUF4614
Motif
Other DBs
NCBI-GeneID:
108260510
NCBI-ProteinID:
XP_047008242
Ensembl:
ENSIPUG00000016281
UniProt:
A0A979EHC3
LinkDB
All DBs
Position
29:complement(15543951..15547672)
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AA seq
651 aa
AA seq
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MMIVNTLGVSVAPRMSPVMEEGPEEDSEEDVRPSTVPITHFNDNNSNNNKEREKKKKAKK
EKKEKKEKKEKRNRKEQKEQENEKEKQKEKEKEKEKEKEKKEAPKEVFVINPASNLYYQW
LLLITMPVMYNWTIIIARACFEELQHEYLITWFFLDYICDLLYLADMAFKTRTGYLEQGL
LIKDQKLLIQHYKDSPHFWLDVISMIPTDVLYFILGLDYPEIRINKLLRINRMFEFFDRS
QTMTNYPNIFRICTLVMYIIIIIHWNACLYFSFSKAIGFGSDPWVYPALTEPEFGDLLRK
YSFSLYWSTLTLTTIGETPSPELDSEFLFHVVDFLVGVLIFATIVGNIATMISNMNAAQA
QFQARIDSIKQYMQVRHVSKDLEERVIKWFDYLWTNKKAQDEREVLRYLPDKLRAEIGMN
VHLDTLKKVRIFADCEAGLLIELILKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVA
DDGVTQFCVLGDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEY
PDAKNMLEEKGRQILMKDGLIDLDPANLKPDQKDLEDRVNRIYSTMELMQSKVKKLLADY
EKSENQLTQRIVQIEHYAGEKVEEDEDEGQKEVMEEAAPKQVTEEKKEEDK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgtgaatactttgggagtctcagttgctccccggatgtctccggtcatggag
gaaggcccagaggaagacagcgaggaagacgtccgtccttctaccgtcccgataacgcac
tttaatgacaataacagcaacaacaacaaagagcgagagaagaagaagaaagcgaaaaag
gagaaaaaagaaaaaaaagaaaagaaagagaagagaaacaggaaggagcagaaggagcag
gagaatgagaaagaaaagcagaaagaaaaagaaaaagaaaaagaaaaagagaaggagaaa
aaagaagcgccgaaggaggtgtttgtgattaacccggccagtaacctgtactaccagtgg
ctccttctcatcaccatgcccgtcatgtacaactggaccatcatcattgcgagagcctgc
tttgaggaactgcagcatgaatatctgatcacatggttcttcctcgactacatctgtgat
ctcctttacctggctgatatggccttcaaaacaaggactggctacctcgagcagggttta
cttatcaaagatcagaaactcctcatccagcactacaaggacagccctcacttctggctc
gacgtcatctccatgatacccactgacgtgctgtacttcatcctgggtttggactacccc
gagatccgcatcaacaagctgctacgcatcaaccgcatgttcgagttcttcgaccgctcg
cagaccatgaccaactaccccaacatcttccgcatctgcactttggtcatgtatatcatc
atcatcatccactggaacgcatgcctctacttctccttctccaaagctattggttttggt
tcagatccctgggtctacccggcactcaccgagccggagtttggggacttgctgaggaag
tactctttcagcctctactggtccacgctgactctcaccaccatcggggaaacaccgtct
cctgagctggactctgagtttctcttccatgtggtagacttcctggttggtgtcctgatc
ttcgccaccatcgttgggaacatcgccacaatgatctccaacatgaatgcggctcaagcc
cagtttcaggcgcgcatcgacagcatcaagcagtacatgcaagtgcggcacgtcagcaag
gaccttgaagagcgagtcatcaagtggtttgactatctgtggaccaataaaaaggcgcaa
gatgaaagggaggtactgaggtacctgccggacaagctccgggcagagatcggcatgaac
gttcacctggatacgctgaagaaggtgaggatcttcgcagactgtgaagcggggctgcta
atagagctcattcttaaattacgacctcaggtgtttagccctggcgattacatctgccgc
aagggcgacatcgggcgggagatgtacatcatcaaggagggtaaactggccgtggtggct
gacgatggagtcacacagttttgtgttctgggtgatggaagttactttggcgagatcagc
atcctgaacatcaaaggcagcaaagcagggaaccgcaggacagctaacatccgcagcatc
ggatactcggacctcttctgtctgtccaaagatgacttaatggaagctctgaccgagtat
cctgatgccaaaaacatgctggaggaaaaggggaggcagatccttatgaaagatggcctg
attgacctggatccagccaacctgaagccagatcagaaggatcttgaggacagagtgaac
cgcatttacagcaccatggagctgatgcagtccaaagtgaagaaactgctagcggattac
gagaaatctgagaatcagctgacacagcgcatcgttcagatagaacactatgctggggag
aaggtggaagaggatgaggacgaggggcagaaggaagtgatggaagaggcggcaccaaag
caagtcacggaggagaagaaagaggaggacaagtag
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integrated database retrieval system
