KEGG   Ictalurus punctatus (channel catfish): 108260561
Entry
108260561         CDS       T04658                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells isoform X1
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108260561 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108260561 (xpa)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108260561 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N
Other DBs
NCBI-GeneID: 108260561
NCBI-ProteinID: XP_047008073
UniProt: A0A979EPA6
LinkDB
Position
29:complement(743209..746868)
AA seq 337 aa
MSHDSDRPYSNHRRRRSPIQTDTAREFSGNVTEFRSVFCVFSVWKLFTHRCSGCVCVCVC
VGIRMECVKSSSSSGVSEVEGKSPSETLTPFMLAKIERNRQRALMLRQARLANRPSAGEG
ATATKLVKTIDSGAGFFIEDEEEEDEQRASRVVHKPAPVMEPDYLMCEECSKPFMDSYLS
NSFDLSVCDKCRDSEEKHKLISRTEAKQLFLLKDCDLDQREPPLRFVLKKNPHNPRWGDM
KLYLKSQVVSRSLEVWGSEGALEEARETREENREVQKQKRFNKKVKELRRAVRSSVFRKD
TSVHQHDYGEEELLDEEEDQYRKVCKTCGHQLTYEKM
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgtcacatgactcagatcgtccatactccaaccacagaagaagacgaagtcccatacaa
acagacaccgcgcgtgagttctccggaaatgtaacggaattccgttcagttttctgtgtg
ttttctgtgtggaagttatttacacaccgctgctccgggtgtgtgtgtgtgtgtgtgtgt
gtggggatcaggatggagtgtgtgaagtcgagttcgtcctctggagtaagtgaggtggag
ggaaaatctccgagcgagacgttaactccgttcatgttggctaagatcgagaggaacaga
cagagagcgctgatgctgaggcaggccagactcgctaaccgcccttctgctggggaaggt
gccacggcaaccaaactagtgaagaccatcgactccggcgctggattcttcatcgaggac
gaggaggaggaggacgagcagcgagcgagcagagtggtgcataagcctgccccagtgatg
gagccggactatctgatgtgtgaggagtgctcgaagccgttcatggactcatacctcagc
aacagtttcgatctctcggtgtgtgacaagtgcagagacagcgaggagaaacacaagctg
atttctcgtacggaggcgaagcagctcttcctgttgaaagactgcgatctggaccagcga
gagccgcctctgcgattcgtcctgaagaaaaacccccacaatcctcgctggggagacatg
aagctctacctgaaatcacaggtggtgtctcggtctctggaggtttggggcagtgagggg
gctctggaggaggcgcgagagactcgagaggagaacagagaagtacagaaacagaaacgc
ttcaacaagaaagtcaaagagttgaggcgtgcggtgaggagcagtgtgttcaggaaggac
accagtgtccaccagcatgattacggtgaggaggagctgctggatgaggaggaggaccag
tacaggaaagtgtgtaagacctgcggacaccagctcacctacgagaagatgtag

DBGET integrated database retrieval system