Ictalurus punctatus (channel catfish): 108260610 Help Entry 108260610         CDS       T04658                                  Name (RefSeq) aprataxin isoform X1   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03410   Base excision repair Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     108260610  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ipu03400]     108260610 Enzymes [BR:ipu01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      108260610     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      108260610     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      108260610 DNA repair and recombination proteins [BR:ipu03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      108260610   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      108260610 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C FHA_2 zf-C2HE HIT FHA Aquarius_N_3rd Motif Other DBs NCBI-GeneID:  108260610 NCBI-ProteinID:  XP_017316515 Ensembl:  ENSIPUG00000017548 UniProt:  A0A2D0QGI4 LinkDB All DBs Position 29:complement(16175703..16180774) Genome browser AA seq 339 aa AA seqDB search MPTCWLVRADESHKPIQLLHYHTHTLGRGPETQIKDQKCSRQQVELRADCNRGFVTVKQL GSNPTSLDDVVVGKGNQVTFKPGQKLYMVNRLYPYTLQFREESTSAGASGEKSKAMKRPH QRDAHEERDQDKEKSCRVSAPSCSNSAARPDQTHAPEKEPAAHWSQGLKVSMQDPSMQVY KDEKVVVIKDKYPKARFHWLVLPWDSISSLKALRPEHVELLKHMERIGARMAQQCPGSDT LRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESQDVIAMLERDGRV SVKDGTSELLKLPLRCHVCHQEQTTIPKLKEHLRGHASS NT seq 1020 nt NT seq  +upstreamnt  +downstreamnt atgccgacctgttggcttgttcgtgcggatgagagccacaaacccattcagctccttcat tatcacacacacactctgggtcggggtccagaaactcagattaaagaccagaaatgctcc aggcagcaagtcgaactgagagcggattgtaaccgaggattcgtcactgtgaagcagtta ggtagcaatcctacaagcctggacgatgtggtcgtgggcaaaggcaatcaggtgaccttt aaacccggacagaagctctacatggtcaatcggctttatccgtacacgctgcagttcagg gaagaatcgacgtctgccggtgcttctggggagaaaagcaaagcgatgaagagaccgcac cagagagacgctcatgaagagagagaccaggataaggagaagagctgcagagtctcagca ccttcctgttcgaacagcgcggctcggccagaccaaacacacgcacctgaaaaggaaccc gcagcacactggagtcaggggctgaaagtctccatgcaggaccccagcatgcaggtgtac aaagacgagaaggtggtggtgattaaggacaagtacccgaaggcacggttccactggttg gttctgccgtgggactccatctccagcctgaaggccctgaggcccgagcacgtggagctg ctgaagcacatggagcgaatcggggcccgcatggcgcagcagtgtcccggctccgacacg ctacgcttccgtctgggttaccacgccattcccagcatgagtcacgttcaccttcacgta atcagccaagactttgattctccgtgtctgaagaataaaaaacactggaactccttcacc actgactacttcattgaatctcaggatgttatcgcgatgttggagagagacggtcgcgtg agcgtgaaggacggcaccagcgagctgctgaagctgccactgcgctgccacgtctgccac caagagcaaaccaccatccccaagctgaaggaacatctccggggtcacgcctcgtcctga

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