Ictalurus punctatus (channel catfish): 108260737
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Entry
108260737 CDS
T04658
Symbol
ngfra
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16 isoform X2
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108260737 (ngfra)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108260737 (ngfra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108260737 (ngfra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108260737 (ngfra)
04090 CD molecules [BR:
ipu04090
]
108260737 (ngfra)
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108260737 (ngfra)
CD molecules [BR:
ipu04090
]
Proteins
108260737 (ngfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Motif
Other DBs
NCBI-GeneID:
108260737
NCBI-ProteinID:
XP_017316743
Ensembl:
ENSIPUG00000024356
UniProt:
A0A2D0QDJ3
LinkDB
All DBs
Position
2:complement(31390275..31441090)
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AA seq
347 aa
AA seq
DB search
MDTLAWMVFCAAVAVACGSTLEFPQEDVCASGHYTSGGECCIECPPGEGVITPCGDTQTE
CGQCLDSETYSDKYSYTDKCQTCTECTGLMRMETPCTDSNDAACVCDYGYYMSDVTGGCE
PCTVCPRGHGVYVRCEPDRDTICEPCEDDTYSDQESSLDPCLPCTVCNDGSEELETLRDC
SPIADALCYDPLAPTMASPSTPPELPWYELRSPGPDVESTTAKPSSPRFIGGGLNENLIP
IYCSTLAAVLIGLLAYIVFKRWNSCKQNKQAANNRAATANQTSPSPEGEKLHSDSGISVD
SQSLQEQQQLQTQAEAHTQTQTQLHVPEQIVVRVDGGAQSGSPPSQA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacactttagcgtggatggtgttttgcgcggcggtggcagtagcgtgtggctctaca
ttagaatttccccaggaagacgtatgtgcttctggtcactacaccagcggtggtgaatgc
tgcatagagtgtccaccgggggagggtgtaatcaccccgtgtggagatactcaaaccgag
tgtggccagtgccttgacagtgagacgtactcggacaaatacagttacacggacaagtgt
cagacctgtacagagtgcaccgggctcatgcgcatggaaacgccatgcactgactcaaac
gatgctgcgtgtgtgtgtgattatggctactacatgagtgacgtgacgggtggctgcgag
ccgtgcacagtgtgtccacgtggtcatggggtctacgtgcgctgtgagcctgaccgtgac
acgatatgtgagccgtgtgaggatgacacctactcagaccaggagagctcgctggatccc
tgcttaccctgcaccgtctgcaacgatggctcagaagaattagaaacactgagggactgc
tcgcccatagccgatgccttgtgttatgatccgctggctcccaccatggcatctcccagc
actcctcctgagttgccgtggtacgagctcagaagccccggcccggatgtggagagcacc
acggctaagccaagctcaccacgcttcattggtgggggtctcaatgagaatctcatcccc
atctactgctccaccctggcagccgtgctcattggcctgctcgcgtacatcgtcttcaaa
agatggaacagctgcaagcagaacaaacaggcggccaacaaccgagcggccacggccaat
cagacatctccgtctccggaaggagagaagctccacagtgacagtggcatctctgtggac
agccagagccttcaggagcagcagcagctgcagacacaggccgaggctcacacacaaacc
caaactcagctccacgtgcctgaacagatcgtggtaagggtggatggaggggctcagtcg
ggctctccgccatcacaggcatga
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