Ictalurus punctatus (channel catfish): 108260773
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Entry
108260773 CDS
T04658
Name
(RefSeq) vacuolar protein sorting-associated protein 37A
KO
K12185
ESCRT-I complex subunit VPS37
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108260773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108260773
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108260773
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
108260773
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108260773
Exosomal proteins of colorectal cancer cells
108260773
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mod_r
UEV
UQ_con
Motif
Other DBs
NCBI-GeneID:
108260773
NCBI-ProteinID:
XP_017316810
Ensembl:
ENSIPUG00000022622
UniProt:
W5U6H7
A0A2D0QH77
LinkDB
All DBs
Position
29:complement(918496..924125)
Genome browser
AA seq
385 aa
AA seq
DB search
MNWIFPQSKSSGAIPPLNSLQKQRQRQIESLKAAHSTIAEIQKDVEYRIPFTVNNSTINI
NILLPPQFPQEKPVVTVYPPVGHHIVDGNNGTVITSPLVTNFGMHSDLGKVIQSLLDEFW
KSPPALMPGAPSFPFMYKPPYPTQNFHFVPAFPSQDPQRPVVPALLPPAPGSEMQQVTNR
PPAPVYGLITDLPLPVPMADSQTGLNGHIYRMPEIPDSFPELSEMSVSQLKDMSDNEDVL
LEFFACLPQLKQVSSDKEDLVNTIVTVAKKNLQLEPQLEGKRQEMLYKYEQLTQMKSAFQ
TKMQRQHELSESCSLSALQARLKVAAHQAEEESEETAENFLEGKTEIDDFLTSFMEKRTL
CHSRRAKEEKLQQSISTHGHFPSAH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaactggattttcccgcagtctaagagctctggagcgattccgcctctgaacagttta
cagaaacagagacagcggcagatcgagtcgcttaaagctgcgcattctaccatcgcagag
atccagaaagatgtggagtaccggattcctttcactgttaacaactcgaccatcaacatc
aacatattgcttccaccacagtttcctcaagagaagcccgtcgtcaccgtgtatcctccc
gtcggtcatcacatagtggacgggaacaacggcaccgtgatcaccagccccctcgtcacc
aacttcgggatgcactcggacctggggaaagtaatccagagcttgctggatgagttctgg
aagagtccgcctgccctgatgcccggcgctccatccttcccgttcatgtacaagccgccg
taccctacgcagaactttcattttgtccccgctttcccgagccaggacccccagcgcccc
gtcgtccccgccctgctcccaccggccccggggtcagagatgcagcaggtgacgaaccgt
cctccggcaccggtgtacgggttgatcacggacctcccgctgcccgtccccatggccgac
tcacagaccgggctgaacggacacatctacaggatgcccgaaatccccgactcgtttcca
gaactttccgagatgagtgtgtctcagctgaaggacatgagcgataatgaagacgtgctg
ctggagttttttgcgtgtctgcctcagctcaagcaggtctccagcgataaagaagacctg
gtgaacaccatcgtcactgtggccaaaaagaatctgcagctggagcctcagctggaaggg
aagagacaggagatgctgtacaaatatgagcagctgacccagatgaagtcagcgttccag
accaaaatgcagagacagcacgagctcagtgagagctgcagcctgagtgccctgcaggcg
aggttaaaggtcgcggcccatcaggccgaggaggagtctgaggagacggccgagaacttt
ctggaaggaaagacggagatcgacgactttctcaccagcttcatggagaagaggacgctt
tgccacagcaggagagctaaagaagagaaacttcagcagtccatctccacgcacggacac
ttcccctcggcacactag
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