Ictalurus punctatus (channel catfish): 108260802
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Entry
108260802 CDS
T04658
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04517
IgSF CAM signaling
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108260802 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108260802 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108260802 (rapgef2a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108260802
NCBI-ProteinID:
XP_017316884
UniProt:
A0A2D0QF14
LinkDB
All DBs
Position
29:complement(3207347..3234377)
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AA seq
1511 aa
AA seq
DB search
MCLVLVSGFKNDRMASYVDSSFRQAIMKNPSERTQQDLQIVYSYLHGMEALSSLREHQLR
LMCETVRYEHHEANEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGC
ECIVLEASEMIVVDYVEDSEEYFQRQVSHRQSRRRFRKINQRGERQTIIDTVEHYPVSKP
PLPPGYHTESSKSQLPADFTKIHLSDGLHLHMSSSQSRSSIASDSGSSSLSDIYQATESD
CGDVDLSGLPETAVDSDEDDDDEEVGRSADPLMSRDIVRDCLEKDPVDRTDDDIEQLLEF
VQQLPAFSSLSVSVRRALCAVMVFAVVERAGTIVLNHGEELDSWSVILNGAVEVMYPDGQ
PETVGMGGSFGVSPSMEKELMVGVMRTKVDDCQFVCIAQQDYCCILNQVELNTQRVEEEG
EIVMVKEHRELDRTGTRKGHIVVKGTPERLIQHLVEDHSVVDPTYIEDFLLTYRTFLSSP
LIVGQRLLDWFNDPSLRDKVTRVVLLWVNNHFSDFEGDPGMTQFLEEFQNNLEKEKMSGQ
LRLLNIACAAKAKSRVVTIARSSRELPLPFTLMGGAERGTHLFISSVEAGSKAEEAGLKR
GDQILEVNGQTFENVHLSKANEILKNNIQLSMSVKTNLLVFKELVARIAEERKNGVPHLP
KIGDGKKSSRYSVPDLGVDTGVVMCPEKVSKKAKAHTMGGRNKLMKILDKTRISILPQKP
YSDLGLGQTQDDSIVGLRQTKQTPPTTTITGSLSSSNPDLAQGQQRIIDYSVQPPAPGFT
QLQDQVLRVFKADQQSRYLLINRETTAREAANLAIREFGLTAGPEAYSLCEVSVTPEGVI
KQRRLPDQLNKLADRIQLCARYYLKSNMETETLCSDVEAQELQRESQVCLLSLSSTEIAN
QLSARNYVLFASIEPTDYIADLFKLRPREPPGNLRNFEDLVNQETFWVSTEIVREPNQAK
RMKLIKHFIKVALHCRDCKNFNSMFAIISGLNLAPVSRLRATWERLPAKYEKLLAELQEV
FDPSRNMAKYRNLLNKHNLQPPIIPLFPIVKKDLTFLHEGNDSKVDGLVNFEKLRMIARE
IRHVVRLASVTMDPALLFRTRKKKWRSLGSLSQVSSSSLSDGTVGHRRRGRRSSFLSAKK
LYETELMSRRVRQYLDTLTHESSEDALHALSLQWEPSNNTVHKTAVEKRRVDASPATPRS
PTPKNIPRKKPPGKELAPLGAHSPASHHAEEAQDRQRRQKEDNQSNASSHRSSPPAFPGN
ASRKGPDQLSLLRASSSDLIMADDHTHSHTHAPSHTRTFTQTPNAHRTELDQISLGSYSL
TQDQCDRASLDAADSGRGSWTSCSSGSHDNIQSIPQRIGYYDSRSWEMLTEGPGIGRSQS
ATPLGYWADESEGDTGTIKRRGGKDEVPNVQKSTMSRREGRFREPPPTPPGYTALSLAEV
EELGHNLIHSQTHGRRPPDYNAALQRSRLIKRSLDLEPPPQPRPPPRMHGYTHCPPPRRP
PCDENEQISAV
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttggttttagtcagcggttttaaaaacgacagaatggcgtcttatgtggatagc
agttttcgtcaggcgattatgaagaaccccagcgagaggacgcaacaggaccttcagatc
gtctactcctacctgcatgggatggaagcactgtccagcctgagagaacaccagctcagg
ttgatgtgtgaaacagttcgctacgagcatcatgaagccaacgaggttttatactaccct
gatgacattggaacctgctggtacatcttgctgtctggctcggttttcattaaggaatcg
atgttccttccacgcagcagttttgggaaacgttctgcagggagtttgcggcgaggctgc
gagtgtatcgtcctcgaggcctccgaaatgatagtggtggactatgtggaggacagtgag
gagtattttcagaggcaggtgtcacaccgacagtccaggagaaggttccggaaaataaat
caacgcggagagaggcagaccatcatcgacacggtcgagcattatccagttagcaagccg
cctctgcccccaggctatcacacggagtcttccaaatcccagcttcctgcggatttcact
aagatccacctctctgacgggctccacctccacatgtcgtccagtcaatcccgatccagc
atcgccagtgactcaggaagcagcagcctatcagatatttaccaggctaccgagagcgat
tgcggcgacgtggatctcagcggactgcccgagacggcggtggattcggacgaggatgac
gacgacgaagaagtggggagatcggcggaccccctcatgagtcgagacatcgtgagagac
tgcctggagaaagaccccgtggaccgtacagacgatgacatcgagcagttactggagttc
gtgcagcagctgccggcgttctccagtctcagcgtgtctgtgaggcgagcgctctgtgcc
gtcatggtgtttgccgtggtggaacgtgccggaactatcgtgctgaaccacggagaggag
ctggactcatggtcagtaatcctgaacggagccgtggaggtgatgtatccggatggccag
cctgagactgtagggatgggaggcagtttcggagtctctccctccatggagaaagagctc
atggtcggcgtcatgaggaccaaagtagacgactgccagtttgtgtgtatagcgcagcaa
gactactgctgcatcctgaaccaggtggaactgaacacacagcgggtggaggaggaggga
gagatcgtaatggtgaaagaacaccgggagctcgaccgcacaggaacacgcaaaggacac
atcgtcgttaagggcaccccagagcgtctgattcagcatttagtggaggaccactccgta
gtggacccgacgtacattgaagacttcctgttgacctaccgcaccttcctgtccagtcct
cttattgtgggccaaagacttttagactggttcaacgaccccagtttacgtgacaaggtg
acacgggtcgtgttactttgggttaataatcacttcagtgactttgagggagacccggga
atgacacagttcctagaggagttccagaacaatctggaaaaagaaaaaatgagtggtcag
ttgcgtttgctcaacatcgcgtgcgccgccaaggccaagtcgcgagtagttacgatcgcg
aggtcgtctcgggagctgcccctccccttcactctgatgggcggtgctgagcgaggaacg
cacctcttcattagctctgtcgaagctggcagtaaggcagaagaggcggggcttaagcgt
ggagaccagatactggaggtgaacgggcagacgtttgagaatgtacacctgtccaaagcc
aacgagatcctcaagaataacatacaactgtccatgagtgtcaaaaccaacctactggtc
tttaaggagctggtggcacgaatagccgaggaacggaaaaacggggttcctcaccttcct
aagatcggtgacggaaagaaaagctcccgctactccgtacccgatctcggggtcgatacc
ggggtcgtcatgtgtccggagaaggtcagcaagaaggctaaagcgcacaccatgggcggc
cgcaacaaactgatgaagattctggacaaaacgcggatcagcattctacctcaaaaacca
tacagtgacctcggattggggcagacgcaggacgacagcattgtgggcctgaggcagacc
aagcagactccgcccaccacgacaatcaccggaagcttgtcgtctagcaaccctgacttg
gcgcagggccaacagcgcatcatcgactacagcgtgcagccacctgcacctggattcact
caattacaagatcaggtgctacgcgtgttcaaggcggatcaacaaagtcgctacctgctg
atcaatagggaaacgacggcacgagaggcggccaatctggcgatccgagagttcggcctg
accgccggccccgaagcttattcgctgtgcgaggtgtccgtcacgccggagggcgtcatc
aaacagaggagacttccagatcagctcaataaacttgctgaccggattcagctctgtgcg
aggtactaccttaagagtaacatggagacggagacactgtgctcggacgtcgaggctcaa
gaactgcaaagagaatctcaggtttgtctgttatctctcagctccacggagatagccaat
cagctctcggcacgcaactacgtgctctttgccagcatcgagcccaccgattacatcgca
gacctcttcaagctgcgtccccgcgagccgccgggcaacctccgcaacttcgaagacctc
gtcaaccaggagaccttctgggtctccacggagatcgtgcgggaacccaaccaggccaag
cggatgaagctaatcaaacacttcatcaaagtggcccttcattgtcgggactgcaaaaac
ttcaactccatgttcgctatcatcagtgggctgaatctcgcccccgtgtcgcgtctgcgt
gctacgtgggagcgtctacctgctaaatacgaaaagttgctggccgagctgcaggaagtc
ttcgacccgtcgcgcaacatggccaaataccgcaacctgctgaacaagcacaatctccaa
ccgccgatcattcctcttttccccatcgtcaagaaagacctcaccttcctccacgagggt
aacgactctaaagtggacggactggtcaatttcgagaaactgcgaatgatcgctcgagag
atcaggcacgtggtcaggttggcgtccgtcaccatggatccagcgctgctcttcaggacg
aggaagaaaaaatggaggagtcttgggtctctgagtcaggtgagcagctcctcattgtct
gacgggacagtaggtcataggaggagaggcagacggagctccttcctcagcgcaaagaaa
ctgtacgagactgagttgatgagcagacgagtgcgtcagtacctcgacacgctcacgcac
gagagcagtgaggacgccttacatgctctgtctctgcagtgggagccttccaacaacaca
gtgcataagaccgctgtggaaaaaaggcgagttgatgcgtctcccgcaacgccaagaagc
cccactccaaagaatatccctcgaaagaagccacctggcaaagaattggcaccattaggt
gcacattcacccgcgtctcaccacgcagaagaggctcaggatagacagagaagacagaag
gaagacaaccaatcgaacgcttcctctcaccgttcgtccccgcccgctttccccgggaac
gcgtccagaaagggacctgatcagctgagtctcctgagggcctcatcatctgatttgatc
atggcagatgaccacacccacagccacacacacgccccctctcacacacgcacgttcaca
cagactcctaacgctcaccggacggagctagaccagatcagcctcgggtcttattcgctg
acccaggaccagtgtgaccgtgcctcattggacgccgctgacagtgggcggggcagctgg
acctcctgctccagcggctctcacgacaacatccagagcatccctcagcgcatcggctac
tacgacagccgcagctgggagatgctgacggaggggccgggcatcgggcggagccaatcg
gccacgcccctgggctactgggccgatgaatcggaaggcgacacgggcacgatcaagcga
cgagggggaaaagacgaggtcccgaacgtgcaaaagagcaccatgagtcgaagggagggg
cgtttccgagagcctccacccactccgcctgggtacaccgctctgtcgttggctgaggtc
gaggagctcgggcataacctcatccacagtcagactcatggacgacgcccaccggactac
aacgcggccctgcagaggtcccggctcatcaagaggtcactggacttagaaccgccccca
cagccacgcccacccccccgcatgcatggatatactcactgtccgccaccacggcgacca
ccgtgtgacgaaaatgagcagatatctgcggtgtga
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integrated database retrieval system
