Ictalurus punctatus (channel catfish): 108260810
Help
Entry
108260810 CDS
T04658
Name
(RefSeq) paired box protein Pax-5 isoform X1
KO
K09383
paired box protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108260810
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108260810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
108260810
NCBI-ProteinID:
XP_017316900
Ensembl:
ENSIPUG00000001569
UniProt:
W5ULD2
LinkDB
All DBs
Position
29:2069573..2121663
Genome browser
AA seq
417 aa
AA seq
DB search
MDLDQKAPSGRIGRSGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLA
ERVCDNDSVPSVSSINRIIRTKVQQQPGQSGSVSAHNLVSTVAVTQVSAVTSDAAGSSYS
ISGILGISSAADASKRKRDENLQDSSLANGHAHSGRDFLRKQMRGELFTPQQLEVLDCVF
DPDIYSNHDTIKPAQTADYSAMASLAGGLEEMKSSLANQTAADLGPSVAGPQSYQLVSGR
DLGSTTLPGYPPHVPPAGQGSYSAPSLTGMVPGGEFSGSPYSHPQYSTYNESWRFANPSL
LVFQQEYGSLLGSERAASSGLFPSQTTQPAGSPYYYGAATRGSGPAATATASAYDRH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacttggatcagaaagctccatcagggcgcatcggacggtcggggcacggaggggtg
aaccagcttgggggggtgtttgtgaacgggcggccgctgcccgacgtggtgaggcagaga
atcgtagagctggctcaccaaggcgtacggccatgcgacatttcccgccagctgcgcgtc
agccacggctgcgtcagcaagatcctgggcaggtactacgagacgggcagcatcaggcca
ggcgtgatcggaggatccaaaccaaaggttgctacacccaaagtcgtcgacaaaatcgct
gattacaaacgccaaaaccccaccatgtttgcctgggagatacgagaccgactactggcc
gagagagtgtgtgacaacgacagcgtgcccagcgtcagctcaatcaacaggatcattcgc
actaaagtccagcagcagcctggccaatcaggaagcgtctctgcgcataatttagtgtcc
accgtggcggtgacccaggtctccgcggtaaccagcgacgccgcaggctcctcgtactcc
atcagtggaattctgggaatcagctcggcggctgacgctagcaagagaaagagagatgaa
aatcttcaggactcttcgttggcgaacggccacgcccactcaggccgggacttcctgcgc
aagcagatgcggggggagctcttcacgccacagcagctcgaggtattggactgcgtgttc
gatcctgatatttactccaaccatgacaccatcaagcccgcccagacggctgattactcg
gcgatggcgtctctggccggcggactagaagagatgaagagcagcctggccaatcagacg
gcggcggatttgggcccgagcgtagcaggacctcagagttaccagctagtgtcgggtcgt
gatctaggcagcaccacgcttccaggttaccctcctcacgttcccccggccggccagggc
agctactcagccccgtcgctcacaggaatggtgcccgggggcgagttctcgggcagtccg
tactcccacccgcagtactccacgtacaacgagtcgtggaggttcgccaacccgagcctg
ctggtgttccaacaggagtacggttctcttctaggctcagaaagagcagcttcttcaggc
ctttttcccagccagaccacacaacctgcaggatctccgtattactacggcgcagccaca
cggggttcaggacctgcggccacggcgacagccagcgcctacgaccgccactga
DBGET
integrated database retrieval system
