Ictalurus punctatus (channel catfish): 108260861
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Entry
108260861 CDS
T04658
Symbol
acsl1a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00061
Fatty acid biosynthesis
ipu00071
Fatty acid degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
ipu03320
PPAR signaling pathway
ipu04146
Peroxisome
ipu04216
Ferroptosis
ipu04920
Adipocytokine signaling pathway
Module
ipu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108260861 (acsl1a)
00071 Fatty acid degradation
108260861 (acsl1a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108260861 (acsl1a)
09143 Cell growth and death
04216 Ferroptosis
108260861 (acsl1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108260861 (acsl1a)
03320 PPAR signaling pathway
108260861 (acsl1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108260861 (acsl1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108260861 (acsl1a)
Enzymes [BR:
ipu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108260861 (acsl1a)
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108260861 (acsl1a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of breast milk
108260861 (acsl1a)
Exosomal proteins of breast cancer cells
108260861 (acsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CE2_N
Motif
Other DBs
NCBI-GeneID:
108260861
NCBI-ProteinID:
XP_017317003
Ensembl:
ENSIPUG00000023501
UniProt:
A0A2D0QFC8
LinkDB
All DBs
Position
29:complement(1599633..1619751)
Genome browser
AA seq
697 aa
AA seq
DB search
MQVQDLIWQFRLPEFGDFRQYVRSLPTNTLMGMGAFAAITTYWYATRPRALKPPCDLTMQ
SVEVEGEEFARRSTLLDSDRLMIRFYDDARTMYEVFLRGIRVSNNGPCLGSRKPKQPYEW
LSYKEVADRAEMIGSALLHRGHSKEGDKYIGIFSQNRPEWTISELACYTYSLVAVPLYDT
LGTKAIGYIVDKAEISTVICDTVEKVRTVLECVSGREHSVRTVVLMEEKESELTARAEKL
GIQILSLRELEALGRAYHKRPVPPTPEDLALVCFTSGTTGQPKGAMLTHGNVISNCAAFI
RITKIHCMLNHTDIHVSYLPLAHMFERVVESVILVHGARIGFFQGDIRTLMDDLKTLKPT
VFPVVPRLLNRMFDKIFGQANTPLKRWLLDFATRRKESEMRSGIVRKDSMWDKLIFNKVQ
VSLGGRVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCSMSLPGDWTAGHVG
PPLPCNYVKLIDVAEMSYYAAEGEGEVCVKGPNVFQGYLKDPEKSAEAIDRDGWLHTGDV
GKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYIHSDPVAQIFVHGDSLQACLIGIV
VPDPEFLPGWAKKRGLVGSYLELCKSKEVKNAILEDIVRLGKEGGLKSFEQVRDIVLNPE
MFSVENGLLTPTLKAKRTELRNHFKEQIDRLYAKIKT
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgcaggatctgatttggcagttccggttgcccgaatttggcgacttcaggcaa
tatgtgcgtagtttgcccaccaacacgctgatgggcatgggtgcgttcgccgccatcacc
acctactggtacgccaccagaccacgagccctgaagcccccctgtgacctcaccatgcag
tctgtggaggtggagggcgaggaattcgctcgccgttccaccctcctggacagcgacagg
ttgatgatccgcttctatgatgatgcacggaccatgtacgaggtgtttcttcgtggaatc
agagtgtccaataacggcccttgtttaggatcgagaaaacccaagcagccatacgaatgg
ctctcgtacaaagaggttgcagacagggccgagatgattggctcagcgttgctccacaga
ggtcacagtaaagaaggagacaaatacattggtatcttctcccagaacagacctgagtgg
actatatctgagctggcctgctacacgtactcgctggtggctgttcccctgtatgacaca
ctgggcaccaaggccatcggctacatcgtagacaaagccgagatatcgacggtgatctgt
gacacggtggagaaggtgcgcacggtgctggagtgtgtgtcgggtcgagagcacagcgtc
aggaccgtcgtactgatggaggagaaggagagcgagctcacggcacgagccgaaaagctg
ggcatccagattctcagcctgagggaactggaggctctcggcagagcttatcacaaacgc
ccggtgcctcctacacctgaagacctcgcactggtctgcttcaccagcggaacgacaggg
cagccgaagggtgcgatgctcacgcacggcaacgtcatctccaactgcgccgccttcatc
cggatcacgaagatacactgcatgctcaaccacaccgatatccacgtatcttaccttccc
ctcgcgcacatgttcgagagggtggtagagagtgtgatcctggtgcacggcgcgaggatc
ggtttctttcagggcgacatccgtacgctgatggacgatctgaagactctcaaacccacc
gtgttccccgtcgtcccccgactcctcaaccgcatgttcgacaagatctttgggcaggcg
aacactccgctgaagcgctggctgctcgacttcgccaccaggaggaaagagtcggagatg
cgcagcggcatcgtgaggaaggacagcatgtgggacaaactcatcttcaacaaagtccag
gtgagtctgggtgggcgtgtgaggctgatgatcaccggcgccgctcccgtgtcccccact
gtgctgacgttcctgcgggctgctctcggttgccagttttatgaaggttatggacagaca
gaatgcactgcaggatgctccatgtctctgccaggagactggacggcaggtcacgtgggt
cctcctttaccctgtaattatgtgaaactgatcgatgtggctgagatgagctactacgca
gccgagggagagggcgaggtgtgtgtgaaaggaccaaacgtgttccagggctatctgaaa
gatccggagaagtccgcggaggccatcgatagagatggctggctgcacacaggcgacgtc
ggcaaatggctcccgaacggcacgctgaagatcatcgacaggaagaagcacatctttaag
ctggctcagggcgagtacatcgctcccgagaagatcgagaacatctacatccacagcgac
cccgtggctcagatcttcgttcatggagacagtctgcaggcatgcttaatcggcattgtg
gtaccagaccccgaattcctccctggatgggccaagaaaagaggacttgtgggctcctac
ctcgagctgtgcaagagcaaggaagtgaaaaatgccattctagaggacattgtgcggttg
gggaaagaaggcggcctgaagtcctttgagcaggtgagggacatcgtcctgaaccccgag
atgttctccgtggagaacggcctccttacaccaaccctgaaggccaagagaacggagctg
aggaaccacttcaaagaacaaatcgatcggctctacgccaagatcaagacgtaa
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