Ictalurus punctatus (channel catfish): 108260884
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Entry
108260884 CDS
T04658
Name
(RefSeq) vitrin isoform X1
KO
K24506
vitrin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108260884
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
108260884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
LCCL
Mucin
VWA_CoxE
New_glue
Rxt3
Glycoprotein
Motif
Other DBs
NCBI-GeneID:
108260884
NCBI-ProteinID:
XP_017317040
Ensembl:
ENSIPUG00000007109
UniProt:
A0A2D0QHS1
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Position
29:7181632..7220075
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AA seq
802 aa
AA seq
DB search
MLRAPLATIFFGLLLVFSSKAKPNGKDKKAKQVVPDIECDARAGKISFPEFIVRCPSSCR
ETKEKVYGTVVFASISSICNAAIHNGVITNAGGKVIVKKMAGQEPYKGTFANGIRSLSLP
KWRESFTVSVGKPKKGVIYPATLESQKEHSTTSPTTPAPDPTTTTSELTTTTTTTTTTPP
PTTPTTTTTTTARPRAAVHKVRDAGNSHPYLAAASARQTQNGQAKGLHQVVRSGSAFAGR
FPPRINPGARRPEAGANNRRQPSVPATSAFSRVQPVQPERNQHTIPTNPALARRKWPHPV
YAQPNWFSGPKRPTDVSNSEPDTGYTWSNVDTVDSPASDPRPEISEYERWYFGQYPPQPA
DTDSGPKHLPETLHTRVEPVEVWKPEGNPFDLDLSDRGKDPLPRVPDTQGNTNCKVDIAF
LMDGSWSIGKRRFKIQKDFLSEVSQVINVGINGPMMGIIQYGDDPVTEFSLRQFSSSKDL
KPAIDKIIQKGGLSNVGTALFYVNKHFFSDANGNRGGAPNVVVVLVDGWPTDKVEEASRL
ARESGINIFFVTIEGPDDSEKHNVVEANFVDKAVCRTNGFFSLPVTSWFALRKAAQPLVK
RVCDTDRLVCSKTCLNANDIAFVIDGSSSVGTGNFRTVLQFVANVTREFEISDTDTRIGA
VQYTYEQRLEFAFGQHNTKADVLNAIRRINYWSGGTSTGAAITYAAEKLFSKSKPNKRKI
MIVITDGRSYDDVRAPALAVHHSGVIAYSIGIAWAAQDELEYIATDPDKDHSFFVDEFDN
LYKYVPKIIHNICHEFNSQPRN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgttgagagctccacttgccaccatcttttttggactccttcttgtttttagcagcaag
gctaagccaaatggaaaagacaagaaggcaaaacaagttgtgccagatatagaatgtgat
gcgcgtgcagggaaaatcagcttcccagaattcattgttcggtgcccatccagttgccgt
gagaccaaggagaaggtttatgggacggtcgtctttgcctccatatccagcatttgcaat
gctgctattcacaatggggtcattacgaatgctggaggaaaggtgatcgtaaagaagatg
gcaggacaagagccgtataaaggcacttttgcaaatggcatccgctcactgtccctcccc
aaatggagagagtctttcaccgtctcagttggcaagccaaaaaaaggtgtgatctaccct
gctaccttggaaagtcagaaggaacactccaccacatcgcccacaacgccagctccagac
ccaacgacaaccacaagcgagctaaccaccaccaccacaaccaccaccacaaccccaccc
ccaacaactcccaccacaactacgaccaccaccgcgaggccacgggctgcagttcataaa
gtcagagatgcaggcaacagtcatccataccttgcagcagccagtgcacgacagacacag
aatggccaagcaaagggtcttcatcaagtagtcagaagtggctcagcctttgcaggaaga
tttccacctcgtatcaacccaggtgcacgcaggccagaggcaggtgccaataataggaga
cagccatcagttcctgctacctcagctttcagtcgggtccagccagtccagccagagagg
aaccagcataccattcccaccaatcctgcccttgctcggagaaaatggccacatcctgtc
tacgcccaacccaattggttttctggtccaaagagaccaacagatgttagtaactctgag
ccagatacaggctacacatggagcaacgtggacactgttgattctccagcttcagaccca
agaccagaaatatcagagtatgagcgctggtactttggacagtatcctcctcaaccagca
gatacagacagtggaccaaagcacctccctgaaactctccatacgagagtggagccagtg
gaggtgtggaagccagaagggaacccgtttgatttagaccttagtgaccgagggaaagac
cccttacccagagttccagacactcagggaaacacaaactgtaaagttgacatcgccttc
ctcatggatggcagctggagcattggcaagcgtcgttttaagatccagaaagacttcctg
tctgaggtttcccaagtcattaatgtaggcataaatggcccaatgatggggatcatccag
tatggggatgatccagtgacagagttcagtctacgccagttctctagctccaaagacctc
aaacctgctattgacaagattattcagaaaggcgggctctccaatgtggggacagccctc
ttttacgtcaacaagcatttcttcagcgatgctaatggaaaccgaggtggggcacccaat
gttgttgtggtgctggtggacggctggcctacagacaaagtggaggaggcttcaagattg
gcacgggaatcaggcatcaatatcttttttgttaccattgaaggcccagatgacagcgag
aagcacaatgtggttgaggccaattttgtggacaaggctgtgtgcaggaccaatggcttc
ttctcactgccagtgaccagctggtttgctctacgtaaggcagcacagcctctggtgaaa
cgtgtgtgtgatacagaccggctcgtgtgcagcaagacatgcctgaatgccaatgacatc
gcctttgtaattgacggctcaagcagcgtaggtaccggcaacttccgtactgtgctgcag
ttcgtggccaacgtgacgcgtgagttcgagatctccgacacggatacacgtattggtgct
gtgcagtacacttatgagcagcgactcgagtttgcctttggccagcataacaccaaggct
gatgtcctaaatgccattcgccgcatcaattactggagtgggggtactagtacgggtgcc
gccatcacttatgctgctgagaagctcttcagcaagtccaagccaaacaagcgtaagatc
atgattgtcatcacagatgggcgctcctatgatgatgtgcgtgcgcccgctctggcagtg
caccactctggtgtgattgcttactccatcggcattgcctgggctgcacaggatgagcta
gaatacatcgccacagacccagacaaagatcactccttctttgtggatgagttcgacaac
ctctataagtatgtgcccaagatcatacacaacatctgccacgagtttaactctcagcca
cggaactaa
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