Ictalurus punctatus (channel catfish): 108260906
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Entry
108260906 CDS
T04658
Name
(RefSeq) F-box only protein 10 isoform X1
KO
K10296
F-box protein 10
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108260906
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108260906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box
F-box-like
CHAD
Motif
Other DBs
NCBI-GeneID:
108260906
NCBI-ProteinID:
XP_017317105
Ensembl:
ENSIPUG00000003036
UniProt:
A0A2D0QHX5
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All DBs
Position
29:complement(3340963..3353511)
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AA seq
950 aa
AA seq
DB search
MEASSLPAELWRLILAYLPLGDLGRCCLVCHAWRELVLSLDSTRWRQLCLGLREWRHPNW
PRRPHLAPPSWREALRQQALASRTWTQNGAELHSSTCLHLFRRRKDRKVWHVGSVPGHGY
ETLRGALATAGPYDRLMLHPGIYEEQAEVTLKVPVEIVGMGKLGDVALLVSFDQQCPTAR
LCNLVLMPAWFSPVVYKTSSGHVQLDNCNFEGCQLHVRGPGTCQARFCSFAQGSSAHFLG
VAISLMDSCEFSGGDSASVTVEGPPVSERNWACKHLAALAKMLTASTMSMSNQDAKDNLG
GVSPRDSAREDWTKQDMDWETGWIKSKPFNGLLSGQEGTMIEDDSMETSSDSGDDEKIEN
GNNVGYTLSYEQHGLAHLSEPRKPDFSMFPVLLNLNAELQRDTDAQELTNSVQGCLLRHC
LLRDGKGGVHLCNHAQARLEANVFRGLNYAVRCIQYAKMVMLRNEVSGCRASGVFLRLSA
QGLIAENNIHSNGEAGLDIRKGANPIILCNRIHSGLRSGIVVLGNGKGSIRSNQIYGNKE
AGVYILFNGNPVVSGNHIFQGLAAGIAVNENGRGLITENVIRQNQWGGADIRRGGDPVLR
NNFICHGYSDGVVVGERGRGLIEGNHIYGNRGCGVWVMLSSLPQLIGNYITHNRMYGLAV
FCRKDPAFSASSERGGGERERGGQENFHEEGELLAWESDMDSEDERFSTRRPITVALVEN
NCISQNGAVGVYVKSSEALNVVGNMVASNRAAGVAIVQSAQLTRLVSNCVHGNGRAGITV
DRECRVELRGNGIYGNSYHGVCFRGDGQIVENDVAGNGAVAVRLIESADVKVLRNRVQSL
RGCAISVRERVRGVIQENLVYQGYPDNKKPHIYTDPLNRECVVLSNTLLTHRPNTSWALE
NPPPRPLGNNPPSSAPSSRPAHLAISMTSRITATVESGCHNNGSIFCCIL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtccagcctgcccgcagagctgtggcgtcttatcctggcctatctacccctg
ggtgacttgggccgttgttgcctggtgtgccacgcatggcgagaactcgtactgagcctg
gatagcacgcgctggcgtcagctgtgcctgggcctccgagagtggcggcatccaaattgg
ccacgccgacctcacttggcaccgccatcctggcgtgaggcgctgcgccagcaagccctg
gccagccgcacatggacgcagaacggagctgagctccactcgtctacctgcctgcacctt
ttccggcgcaggaaggacaggaaagtgtggcatgtgggctccgtgcctgggcacggctat
gagacactgagaggggctctggcgaccgctgggccatacgatcggctgatgctccaccca
ggtatctacgaggagcaggcagaggtgactctaaaagtgccagttgagatcgtagggatg
gggaagcttggtgacgtggctttgctggtgagcttcgatcagcagtgcccgactgccagg
ctgtgtaatttggttttgatgccggcctggttttcaccagtggtgtataagacatcttca
ggtcatgtccagttggacaactgcaacttcgagggctgtcagttgcacgtcagaggacca
ggtacgtgccaggcgcgcttctgttcgtttgcccagggtagctccgcccactttctgggt
gtggccatcagcctaatggacagctgtgagttttccggtggtgactctgcgtctgtcact
gtggaaggtccaccggtttctgagcgcaactgggcttgtaaacacctggctgctttggcc
aaaatgttaaccgcctcaaccatgtctatgagcaatcaggacgcaaaagacaacctgggt
ggagtcagtcccagagattctgcccgagaggactggactaaacaggacatggactgggaa
actggctggatcaaatcaaaaccctttaatggtctgctttcaggccaggagggcacgatg
atcgaggatgacagcatggagacatcaagcgattctggtgatgatgaaaaaatagagaat
ggaaataatgtgggttacacgctgtcctacgagcagcatggtcttgcacacctctcggag
ccacggaagccggacttttccatgtttcctgtgctgctgaatctaaacgcagagctgcag
agggatactgacgcacaggagctgacgaactccgtgcaagggtgcctactgcgccactgc
ctgctgcgtgatggcaaagggggtgtgcatctgtgtaaccatgcccaggcgagactggaa
gccaacgtgttccgaggactcaactatgcagtgcgctgcatccagtatgccaagatggtg
atgttgcgcaatgaagtgagcgggtgccgagcttctggggttttcttgcggctctctgct
caaggcctcatcgctgaaaacaacatccactcaaacggcgaagcaggactagacatacgc
aaaggagccaatcccatcatcctgtgtaacagaatccacagcggcctacgctccgggatc
gtcgttctgggcaacgggaaaggttccatccgcagcaaccagatctacggcaacaaagag
gccggagtctacattcttttcaatggcaatcctgtggtcagtgggaatcacatattccaa
ggtcttgctgctggcattgctgtgaatgagaacggaagaggactgattactgagaatgtg
ataaggcagaatcagtggggtggtgcagacatccgtcgaggaggtgatccagtcctgcgc
aataacttcatctgtcatggctactctgacggagtggtggtgggggagagaggaaggggc
ctcattgagggcaaccacatctatggcaataggggctgtggtgtgtgggtgatgttatcg
agccttccgcagctgatcggaaactacataacccataaccgtatgtatgggctggccgtg
ttttgccggaaggacccggcattttcagcaagcagtgagcgaggaggaggagagagggag
agaggaggacaggagaactttcacgaagaaggcgagctgctagcatgggagagcgacatg
gacagtgaggacgagcgattctcaacccgacgcccgatcactgtggctttagtggagaat
aactgcataagccaaaacggagcagttggcgtgtacgtgaaaagcagtgaggcactaaac
gtggtgggtaacatggtggccagcaaccgggcagcaggcgtagccatcgttcagagcgca
cagctaacgcgacttgtcagcaactgcgtccatggcaacggcagggcgggaatcacggta
gaccgagaatgccgagtggagctccgaggcaatggcatttacggcaacagttaccatggc
gtgtgcttccgtggtgacgggcagatcgtggaaaacgacgtggctgggaacggggcagtc
gcggtacggctgatagaaagcgcggacgtgaaagttctgaggaatcgtgtgcagtctttg
cgtggttgtgctatctctgtaagagaaagggttcgaggtgtgatccaggaaaacctggtg
taccagggctaccctgacaacaaaaaaccgcacatatacactgacccgctcaaccgagag
tgtgtcgtgctcagcaacactctgctcacacacagaccaaacacaagctgggctctggaa
aacccaccacctcgtcctctcggcaacaatccgccaagctccgccccttcgtcgcgccct
gcccacctcgccattagcatgacgagcagaatcaccgccaccgtagagagcggctgccat
aataacggcagcatcttctgttgcattctatga
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