Ictalurus punctatus (channel catfish): 108260912
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Entry
108260912 CDS
T04658
Symbol
ntn1b
Name
(RefSeq) netrin-1b
KO
K06843
netrin 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108260912 (ntn1b)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108260912 (ntn1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
108260912
NCBI-ProteinID:
XP_017317120
Ensembl:
ENSIPUG00000008317
UniProt:
W5UL60
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Position
2:25222897..25278492
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AA seq
603 aa
AA seq
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MLRLFVAWSTLVALCVMVEGARGGGGYGMSMFAAQSSPPDPCYDENGNPRRCIPDFVNAA
FGKDVRASSTCGTPAARYCVVSEKADERTRDCHTCDATDPKKAHPAAYLTDLNNPHNLTC
WQSESYVQHPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWTPFQFYST
QCKKMYNRPSRAAITKQNEQEAICTDSHTDMQPLAGGLIAFSTLDGRPSAHDFDNSPVLQ
DWVTATDIKVTFSRLHTFGDENEDDSELARDSYFYSVSDLQVGGRCKCNGHASKCVRDRD
GNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKL
SGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPISHRRACKACDCHPVGAAGKTCNQT
TGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTATYTSSEEPSDCDSHCKAS
KGKMKVTMKKYCKKDFAVQVHVLKGDKAGEWWKFTINIISVYKQGEHRIRRGDQLLWVRA
KDVACKCPKIKPGRKYLLLGSDDEDSRGQSGVVADKASLLVPWKDQWARRLRKFQQRDKR
GKC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggctgttcgtggcttggagcactctggtggcgctgtgcgtgatggttgaggga
gcgcgcggcggcggcggttacggcatgagcatgttcgccgcgcagtcctcaccgcccgac
ccgtgctacgatgaaaacggcaacccccgccgctgcatccctgacttcgtgaacgcggct
ttcggtaaggacgtccgcgcgtccagcacgtgcggcacaccggcggcgcgctactgcgtg
gtgagcgagaaggccgacgagaggacgcgcgactgccacacgtgcgacgcgacagacccg
aagaaagcgcatccggctgcgtacctcaccgacctcaacaacccgcacaacctcacgtgc
tggcagtccgagagctacgtgcagcacccgcagaacgtcaccctcacactctcgctgggc
aaaaagttcgaggtgacctacgtgagcctgcagttctgctcgccgcggcctgagtccatg
gccatctataagtcgatggactacggcaagacatggacgccgttccagttctactcgacg
cagtgcaagaagatgtacaaccgaccgagtcgcgcggccatcaccaagcagaacgagcag
gaggccatctgcacggactcgcacacggacatgcagccgctcgcaggcggcctcatcgcg
ttcagcactctggacggcaggccgtcggcgcacgacttcgataattcccccgtgctgcag
gactgggtcacggccactgatatcaaggtgacgttcagccgcttacacacgttcggcgac
gagaacgaggacgactcggagctggcccgggactcgtacttctactccgtgtctgatctg
caagtgggtggccgctgcaaatgtaacgggcacgcgtcgaagtgtgtgcgcgaccgcgac
ggcaacctggtgtgtgagtgcaaacacaacactgcgggacccgagtgcgacaggtgcaaa
cccttccactatgaccggccatggcagcgcgcaacagccagagaggccaatgagtgcgtc
gcttgtcactgtaacctgcacgcacgccgctgtcggttcaacatggagctgtataagctg
tcaggacgcaggagcggaggagtttgcctcaactgtagacacaacacggccggacgccac
tgtcactactgtaaagagggctactacagagacatgactaagcccatctcacacagacgc
gcctgcaaagcgtgtgactgtcacccagtcggtgctgcaggtaagacctgtaaccagacc
acaggccagtgtccgtgcaaggatggtgtgactggtattacctgcaaccgctgtgctaaa
ggataccagcagagtcgctcacccatcgccccctgcatcaagattccagtcgcttctccc
actgcaacgtacaccagttctgaagaaccatcagactgtgattcccattgcaaggcctcc
aagggcaaaatgaaggtcaccatgaagaagtattgcaagaaggactttgctgtccaagtg
catgtgctgaagggtgacaaggcaggcgagtggtggaagttcaccattaacatcatctcg
gtgtacaagcagggcgagcaccgcatcagacgtggcgaccagctgctgtgggtgcgcgcc
aaggacgtcgcatgcaagtgccccaagatcaagccaggcaggaagtacctgttgctgggc
tcagacgatgaggactcacgtggccaaagcggtgtagtggccgacaaggccagcctgctc
gttccctggaaggaccagtgggcccgtcgcctccgcaagttccagcagcgtgacaagagg
ggcaagtgctaa
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