Ictalurus punctatus (channel catfish): 108260929
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Entry
108260929 CDS
T04658
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108260929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108260929
Spliceosome [BR:
ipu03041
]
Common components
Common spliceosomal components
hnRNP proteins
108260929
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF3016
RRM_5
PPP4R2
Motif
Other DBs
NCBI-GeneID:
108260929
NCBI-ProteinID:
XP_017317146
Ensembl:
ENSIPUG00000008666
UniProt:
A0A2D0QEP9
LinkDB
All DBs
Position
29:8358901..8378855
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AA seq
290 aa
AA seq
DB search
MDLSPTTSSLMASNVTNKTDPRSLNSRVFIGNLNTMLVTKADVEAIFSKYGKIVGCSVHK
GYAFVQYSNERNARAAVDGEDGRMVVGQVLDINLAGEPKPHRSKTIKRSAGDMYSPSIEL
DYDFQRDYYDRVYSYPSRVPPPPPPLSRAVIPSKRPRVSVSGSRRAKSSFSTKSSQRTSR
TMRADDLQTIKKELTQIKHKVDYLLESLERMEREHSKKSDGKSIKAEETSPQHPSMKKDR
ENAEINDYEEEGDLEEEEIKSQGREEDEEDDDGEQEEGEDDGDSTNGEHS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatctctcgccaactacaagcagcctgatggcgagtaacgtgaccaacaagacggac
ccacgctctctcaactcacgcgtattcatcggcaacctgaacaccatgctggtgaccaag
gcagatgtggaggccatcttcagcaagtacggcaagattgtgggctgttcagtgcacaag
ggctacgcctttgtccagtactcaaatgagcggaatgcacgtgctgccgtggacggggag
gatggacgaatggtcgttggacaagtcctggatattaacctggccggtgaaccaaaacct
cacagatctaagactatcaagcgctcagcaggagatatgtacagcccttcgattgagctt
gactatgacttccagcgagattactatgatagggtgtattcgtacccctcacgggtgcct
cctccccctcctccgctctcccgcgcagtcattccctccaagcggccacgggtcagtgtg
agtggcagccgccgtgcaaagagcagcttctccaccaagagcagccagagaacctcccgc
accatgagagctgatgacctgcaaacaatcaagaaggagctgactcaaatcaaacacaaa
gtggactacctgctggaaagcctggagaggatggaaagagaacacagcaagaaatcagat
gggaagagcattaaagcagaggagacatccccccagcatcccagcatgaaaaaggatcga
gagaatgcggaaatcaatgactacgaagaagagggtgatttggaggaagaggagatcaag
agtcagggaagggaggaagatgaagaggacgatgatggagaacaggaggaaggagaggat
gacggagacagcactaatggagagcactcttaa
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