Ictalurus punctatus (channel catfish): 108260954
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Entry
108260954 CDS
T04658
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ipu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ipu01100
Metabolic pathways
Module
ipu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108260954
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108260954
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108260954
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
108260954
Glycosyltransferases [BR:
ipu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
108260954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
108260954
NCBI-ProteinID:
XP_017317192
Ensembl:
ENSIPUG00000013981
UniProt:
A0A2D0QFW1
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All DBs
Position
2:19989977..20061700
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AA seq
900 aa
AA seq
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MMVGGPCARKSARRSRSALIAALTVLLVQTLIVWNFSSLDSGDAGENGGGGGGAGAGAGG
GGAGREKRDRLGVNKAYGEYPRGRRQQLGKATLRHKRQSDVYYSHRPKEKVRVDSNNENS
VPKDLTDESPDNSNFNKRQPEKAKSSNELVHYGQNSTGAGLRHDSVLTPLPPRHYNQKVK
RSVIATSDIKYDQPPKCEITGKEAISALSRAKTKECRQQIAEVYCRHKDKQLMPEKVTRY
CPLEGKASVNVHWEEDSMETVPAVPVRIAFVLVVHGRASRQVQRLFKAIYHTSHFYYIHV
DQRSDYLHRQMLALAKRYPNVRVTTWRMATIWGGASLLSMYLQSMKDLLAMSHWPWDFFI
NLSAADYPIRTNDQLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGD
RKIPEGITVDGGSDWFLLNRAFVEYVIKTDDDMVTSMKRFYAYTLLPAESFFHTVLENSP
HCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQTARPTFFARKF
EASVNQEIVNQLDAFLFGSYPLGTPGLKAYWENIYDEPDGVHSLSDSLLTHYHSFARLGL
ARAANSLQGDANDNRCRYFAMGHPVAVHSYFLFDEFQGYLVKHQATNLATSKLETLETWV
MPKKFFKFTNPPSNSIRLQFAEIGTDWDAKERIFRNFGNLMGPLDEPVGMQKWAKGSNVT
VTVVWIDPTNVIAATYDVLIDSTAEFTHYRPPLNTPLRPGMWTVRVLHHWNPVAETRFLV
TPLTHHKHLPIRQDDALKVHNGPKKNSYMDQSFHGLNPILNIPVHLGQVEEAEHNAGLTG
MRLERWVDGLVGGVWQAVDICSATPSGCPVLQSCRDTAWSSLSPDPKSQLGPPKANGTIR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggcggtccgtgcgcgcgcaagtcggctcgccgctcgcgctccgcgctgatc
gccgcgctcaccgtgctgctagtgcagacgctcatcgtgtggaacttcagcagcctggac
tcgggggacgccggggagaacggcggcggaggtggaggtgctggtgctggtgctggaggc
ggaggcgcaggcagggagaagagagaccggctcggtgtgaacaaagcctacggcgagtat
ccgagaggcaggaggcagcagctcgggaaagcgaccctgcgccacaagcggcaatcggat
gtctattactcgcatcgtcccaaggagaaggtccgagtggacagcaacaatgagaactct
gtgcccaaagacttgacggacgagagtccggacaacagtaacttcaacaagcggcagccc
gagaaggccaagagctccaacgagctcgtccactacggccagaacagcacgggggcgggg
ctccgtcatgactctgtcctcacgccactccctccacgccattacaaccaaaaggtgaag
aggtcggtcattgccacgtctgatatcaaatatgaccagccgcccaaatgcgagatcacg
ggcaaggaggccatctcagctctgtcgcgtgctaaaaccaaggagtgcagacagcagatc
gctgaggtgtactgtcgacacaaagacaagcagctcatgcctgagaaagtcactcgctac
tgccccctagagggtaaggcgagtgtgaacgtgcactgggaggaagactccatggagaca
gtgccggccgtacctgtgcgtattgccttcgtgctggtggtccatggccgagcctcacgc
caagtacagcgtctcttcaaggccatttaccacacctcacacttctactacatccacgtt
gaccagcgctcggactacctccacaggcagatgctagcgctggctaagcgctacccgaac
gtccgtgtgacgacctggcgcatggcgacgatctggggcggagccagtcttctcagcatg
tacctgcaaagcatgaaggacctgctggctatgagccactggccctgggacttcttcatc
aacctgagtgctgccgactaccccatcaggactaatgatcagctggtggctttcctttcc
aagtaccgcaacatgaacttcatcaagtctcacgggagagataacgctcgattcattaga
aagcagggtctagaccggctcttcttcgagtgtgatacacacatgtggcgtctgggggac
aggaagattccagaaggcatcactgtggacggaggctctgattggttcctgctgaaccgc
gccttcgtggagtatgtcatcaagaccgatgacgacatggtgaccagcatgaagcgcttc
tatgcttacactctcctgccagccgagtcgtttttccacacggtgttggagaacagtcct
cactgcgagagcatggtggacaacaacctgcgcatcactaactggaataggaaactgggc
tgcaagtgccagtataagcacattgtggactggtgtggctgctcccccaatgacttcaaa
ccctctgacctgccccgcttccagcaaacggctcggcccacgttctttgcgcgcaagttt
gaggccagcgtgaatcaggagatcgtgaatcagctggatgccttcctgtttggaagttac
cctctaggcacaccaggtcttaaagcctactgggagaacatttatgatgagcctgatggt
gtccacagcctgagtgattcccttctcacccactaccactccttcgcccgcctcggcctg
gcacgagccgccaactcactgcagggagacgccaacgacaaccgttgtaggtactttgcc
atgggacatcctgtggctgtccatagctacttcctatttgatgagttccagggttacctg
gtgaagcatcaagccactaatctagctaccagcaagctggaaactctggagacctgggtg
atgcctaagaagttcttcaaattcaccaacccaccaagcaattccatcagactgcagttt
gccgagatcgggacagactgggatgctaaggagagaatcttccgcaattttggtaatctt
atggggcctctggacgagccagtggggatgcagaagtgggccaaagggtccaacgtgaca
gtgacggtggtgtggattgaccccactaatgtgatcgctgccacctacgacgtcttgata
gactccactgccgagttcacacactacaggcctccgctgaacacaccactgcggcccggc
atgtggaccgtccgtgtgctgcaccactggaaccccgtggccgagacacgcttcctcgtc
acaccgcttacacaccataaacacctgcccatccgccaagatgacgccttgaaagtgcac
aacggcccaaaaaagaacagctacatggatcagagcttccacgggctgaacccgatcctg
aacatcccggtgcatttgggccaggtggaggaggcggagcataatgctgggctgacgggt
atgaggttggagcgctgggtggacggcctcgttggcggggtgtggcaagctgtggacatt
tgctcagcgacgccctctggctgccctgtcctgcaatcgtgcagagacacggcatggagc
tcgctcagccccgatcccaaatcacagcttgggcctcccaaagctaatggcaccataagg
tag
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