Ictalurus punctatus (channel catfish): 108260983
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Entry
108260983 CDS
T04658
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108260983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108260983
03036 Chromosome and associated proteins [BR:
ipu03036
]
108260983
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108260983
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
108260983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
108260983
NCBI-ProteinID:
XP_017317254
Ensembl:
ENSIPUG00000007740
UniProt:
W5U6M6
LinkDB
All DBs
Position
29:complement(7616744..7642422)
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AA seq
1206 aa
AA seq
DB search
MAEPVAAMCEQLIKAVTVIMDAESNHRYRLEALKFCEEFKEKCPYCIQCGLQLADKSQTA
VVRHFGLQILEHVIKFQWNNMPQHEKVHLKDCTMEMLTNGTYPILEEESHIKDALSRIVV
EMIKREWPQQWPDMLKEMETLTTFGDTQTELVMLILLRLAEDVITFQTLPQQRRRDIQHT
LTQNMDSIFNFLLTILQQHVDEYRKLKIIPGQELKAKAHCRVGMTTLNTLAGYIDWVALV
HITNNSCHLLEILCLLLSEPELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYILS
AAQSVEVGLSEMSYTFLKRLCQVLCALGSQLCALLGSPAEVEVPANLSKYMEAFLAFTTH
PSQFLRSCTQTTWGSMFRHEVLSKEPVIIQMAVKYLKAAMTNLVKSGFPSKNDSPACEYA
RVDFDSDEDFNAFFHSFRAQQGDVIRHSCKIAPLEAFQIAGEWLQYQINSPVNAGNALSK
TGEGMCSTFSPAAVQWEAMTFLTESVLGQIFKILEKEKLPVDQGMELLHAVVNYETRDPV
ILSCILTNLTTLFPFVLHRPEVLPQVFFKLFPAITFEVVEESKAPRTRAVKNVRRHACSS
IIKMCRDYPEFILPCFDMLYTRVKELFTNELLLTQMEKCALMEALVLISNQFKDYNKQKA
FLEELMAPVTARWLSEEMRSVLSDPASFITFIGADQVINEHGAEDQMGINRSRISFCVYT
ILGMVKRARWPADVEEAKAGGFIVGYSPAGAPIYRNPCTEPVLALLPNLLTLIRTHNSLF
LPENLSLLSETFTRTYDVMDVEKNLILGISQPLSDVYDSPVYKSALERMQGFFCTLYDNC
YHVLGHAGPALLQDFYTIEGLEEQLVGSALIHLEHVPDHRLRPLLRVFMKPLVTSCPPEY
YESLLCPLLGLLFSHLLQRLNNRWQIINQRTSMCGPDDDEAYEENQVSQEMLEDRLVRLA
TREVMDLLCASYISRKLPESAANREDADGDEEMMATDSSQLNASQTSDELTELGKCLLKH
EDIYMNLLALSFNSLSWRDTGNCQRAATLICWTLLRQVVGANLLPDAVTWLFTRVLSGLQ
MHGQHDGCNAVLTQLALLIYDALRPQYAELRSIMNQIPNVQPDLLEQFDQKTINPASQKV
GEKKRKDQFKKLIAGAVGKPLGQQFKKEVHIRNLPSLFKKVKPSKDVVTDSENAGLISLF
SPEHDH
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcagagccggtggccgcgatgtgtgagcagctcattaaggctgtgaccgttataatg
gacgcggaatccaatcatcggtaccgcctggaggctctgaagttttgtgaggaattcaaa
gaaaaatgcccgtattgtattcagtgtggccttcagttagcagataaatcccagacagcg
gtggtgagacattttggtctacaaatactggagcatgttataaagtttcagtggaacaac
atgccgcagcatgagaaagtccatttgaaagactgcaccatggagatgttgaccaatgga
acatatcccatcttggaggaggagagtcatattaaagacgctctgtcacgcatcgttgtg
gagatgatcaagagggagtggcctcaacagtggccagatatgctgaaagagatggaaacg
ctcactacatttggggacacgcagacggagctggtgatgctgattctgctgcgtctggcc
gaggacgtgattacgttccagactcttccccagcagcgccggagagacatccaacacaca
ctaacgcagaacatggacagcatcttcaacttcctcctgaccatcctgcagcagcatgtc
gatgagtacaggaaactgaaaataatcccaggacaagagttaaaggccaaagcacattgt
cgagttggcatgaccaccttaaacactctggccggctacatagactgggtcgcgctggtt
cacatcaccaacaacagctgccatttactggagatcctgtgcttactcctgagcgagcca
gagcttcagctggaggctgctgagtgtctgctcattgcaatcagcaggaaagggaaactg
gaagacaggaagccactcatggtgctctttgatgacgtggccatgcactacattctgtca
gctgcacaatcagtagaagtggggctcagcgagatgagctacactttcctgaagaggtta
tgtcaggtgctgtgtgctctaggcagtcagctctgtgccttattgggttcgcctgcggaa
gtggaggttcctgctaacttgagtaaatacatggaagcgtttctcgccttcactactcac
cccagtcagtttcttagatcttgcactcagaccacctggggaagcatgttcagacatgag
gttttatctaaggagcctgttattatccagatggctgttaaatatttaaaagcagccatg
accaaccttgtgaagtcaggattcccatcgaagaacgacagcccggcttgtgagtatgcc
cgcgtggacttcgacagcgacgaggacttcaatgctttctttcattcttttcgggcccag
cagggtgacgttattcgtcattcttgtaagattgctcctcttgaagccttccagattgct
ggggaatggttacaatatcagatcaactcgcccgtcaacgctggaaatgctctatctaaa
acaggagaagggatgtgctcaacgttctcgcccgcagctgtgcagtgggaagccatgacg
tttttaacagaaagtgtgttgggacagatttttaaaatcttggagaaagagaagctgcct
gttgaccaaggcatggagctgctgcatgctgtagtgaactatgagacacgggatcccgtc
atcctgtcctgcatcctcaccaatctcaccaccctcttcccctttgtcctgcatcgccca
gaagttctacctcaagtgttctttaagctatttcctgcgatcacatttgaagtggttgaa
gaaagcaaggctcctcgaacccgagcggtgaagaacgtcagaagacatgcttgttcctcc
atcatcaagatgtgtcgcgattatccagagtttatactgccatgctttgacatgctctac
actcgagtgaaagagctgttcaccaatgagctgctgctgactcagatggagaagtgtgca
ctcatggaggcgctcgtgctgatcagcaaccagtttaaagactacaacaagcagaaggcc
ttcttagaggagctcatggctcctgtaacggcacgctggctctcagaggagatgcgcagc
gtattgtccgatccagcaagctttattacgtttattggtgctgatcaggtcatcaatgaa
cacggtgctgaggatcagatgggaatcaacaggtcaaggattagtttttgtgtgtacacc
attctgggcatggtgaagcgagcacgctggcctgctgatgtggaggaagccaaagccggg
ggtttcatagtgggctactctcctgctggagcgccgatctacagaaacccctgcacagag
cctgtactggccctgcttccaaatctgctcaccctcatcaggacccacaacagcctattt
ctaccagagaatctatctctactcagcgagaccttcacccggacgtatgatgtcatggac
gtggagaagaatctcattttaggaatctcccagccgttgtcggacgtgtatgactctccg
gtgtataaaagcgcactagagcggatgcaaggcttcttctgcacactctacgacaactgt
taccacgtgctaggacatgctggcccagccttgctgcaggacttttatacgatagagggg
ttggaagaacagttagtgggctctgccctcatccacctggagcatgttcctgaccatagg
cttcgccctttgcttcgggtgttcatgaaaccgctggtcacgtcctgtcctccagaatat
tacgagagtcttctctgtccgctgctcggccttctgttttctcatctgctgcagagactg
aacaatcggtggcagatcatcaaccagaggactagcatgtgtgggccggatgatgacgag
gcgtatgaggagaatcaggtatcgcaagagatgctggaagatcggctagtgcgcttggcc
acacgagaggtcatggatctcctctgtgcatcatacatatcaagaaagttgcctgaatca
gcagcaaacagagaggatgcagatggggatgaggaaatgatggcaaccgattcttctcag
ctaaatgcatcgcagacttcagatgagctcaccgaactgggcaagtgtctccttaaacat
gaggacatctacatgaatctgctggctctctcgtttaactctctgtcatggagggacacc
ggtaactgtcagcgtgccgctaccctgatctgctggactttgctaagacaggtggtgggt
gcaaatttgctgccagatgcggtgacgtggctgttcaccagagtgctgagcggtctgcag
atgcatggccagcatgacggctgcaacgcagtactgacgcagctcgccctgctcatctat
gatgccctgcggcctcaatatgcggagctgcgttccatcatgaaccagatccccaacgtc
caacctgacctgctagagcagttcgaccagaaaaccatcaaccctgcatcgcagaaagtt
ggcgaaaagaagagaaaagaccagtttaagaagctcattgcaggagctgtagggaaacct
cttggtcagcagtttaagaaggaggtccacatccgaaaccttccctcgctctttaagaag
gtgaagcctagcaaagacgttgtgactgacagcgagaatgctggattgatctcgctcttt
tcacctgaacatgatcattag
DBGET
integrated database retrieval system
