Ictalurus punctatus (channel catfish): 108261004
Help
Entry
108261004 CDS
T04658
Name
(RefSeq) transcription initiation factor IIE subunit beta
KO
K03137
transcription initiation factor TFIIE subunit beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108261004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108261004
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
108261004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_beta
TFA2_Winged_2
TFA2_E-tether
Motif
Other DBs
NCBI-GeneID:
108261004
NCBI-ProteinID:
XP_017317298
Ensembl:
ENSIPUG00000003793
UniProt:
A0A2D0QF53
LinkDB
All DBs
Position
29:complement(3895713..3914951)
Genome browser
AA seq
289 aa
AA seq
DB search
MDPALLRERELFKKRALSTPAVEKRPASSEASGSSKKKKSKPDKDSSSKNNADSSNGSFN
LKALSGSSGYKFGVLARIVNYMKTRHQRGDTHPLTLEEILDETKLLDIGLKQKQWLMTEA
LASNPKIDVREGKYAFKPKYHLKDKKALLRLLDKHDQQGLGGVLLDDVEEGLPNAAKAIK
ALGDQIIFVARPDKKKILFYNDKHCHFEVDEEFQKLWRSVPVDSIDDEKIEEYLKRQGIS
SMQDTGPKKMTPVQKRKKSGTQKKRRFKTHNDHLNGVLEDYTDGVPSKK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgcactgctgagagagcgtgagctctttaagaagagggctttgtccactcca
gcagtcgagaagagaccggcgtcctctgaagcctctggctcttccaagaaaaagaagagc
aaacctgacaaagactcgtcatctaaaaacaatgcagactccagtaatggatccttcaat
ctcaaagctctctctggaagctcgggctacaaattcggggtcctggcacgaatcgtcaac
tacatgaagacaaggcatcagagaggagacactcatcccctaaccctggaagagatttta
gatgagaccaagctgttggacatcggcttgaagcagaagcaatggcttatgactgaggcc
ttggcaagtaaccccaagatagacgtgcgtgaagggaaatacgcctttaaacctaaatac
catctgaaggacaagaaggcgctgctcaggttgctggacaagcacgatcagcaggggtta
ggaggagtgctgctggacgatgtggaggagggcctgcccaacgctgccaaggccatcaaa
gctcttggagaccagatcatattcgtggccagacccgacaagaaaaagattctcttctac
aatgacaaacactgtcacttcgaagtagacgaagagtttcagaagctgtggcgcagcgtt
ccagtggattccatcgacgacgaaaagattgaagagtacctgaagagacagggaatctcc
tccatgcaggatactggaccaaagaaaatgacgccggtccaaaagaggaagaagtcggga
acgcagaagaagagacggttcaagactcacaacgatcatctgaacggtgtgttggaggac
tacaccgatggagtccccagtaagaagtga
DBGET
integrated database retrieval system
