Ictalurus punctatus (channel catfish): 108261062
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Entry
108261062 CDS
T04658
Symbol
wdr47a
Name
(RefSeq) WD repeat-containing protein 47 isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108261062 (wdr47a)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108261062 (wdr47a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
TPR1-like_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
DUF3752
Beta-prop_SPT8
Vir_act_alpha_C
Motif
Other DBs
NCBI-GeneID:
108261062
NCBI-ProteinID:
XP_017317382
Ensembl:
ENSIPUG00000019038
UniProt:
A0A2D0QGD3
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All DBs
Position
20:complement(12245480..12315309)
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AA seq
919 aa
AA seq
DB search
MNITLPEFYVNPAENVCLIWLMQAFAHNFTIILNFYGSGNSAYTKIFFRFLSLTCILLTL
CPSLRQLILDGQWDEVLQFIQPLECMEKFDRKRFRYIVLKQKFLEALCVNNAMSAEDEPQ
HLELTMQEAVKCLHALEEFCPSKEDYSKLCLLLTLPRLTSHAEFRDWNPSTARVRCFEEA
CTMVAEFIPADRKLSEAGFRAGADRLFQLLVKGVLYECCVEFCQSKATGEEISEAEVLLG
IDVLCGNGSDEPDLSLLSWLRNLVPSVFSCAFEQKVLNVHVDRVVKPVRAAHADLLTPLV
SKLSPCPASPLRRPQSADTYMSRSLNPVLDGLAYGLSGLERRGGTRASEVGKASPMSHSF
ANFQYPGGQSLSRSLMMEEPQCQSIFEESPESSRTETPSDKMMSLSSSQNSRPVSAPGQD
ASATTSTKKNEFRDSMEQYQEYYRQRLRVQQHLEQKQHQRQLYQQMLLEGGVQQQETSPT
AKHNLTETFLNRSIQKLEELNVGMDDLGEEVQALSLQCNGEEGGEAGITSGSAIDTTLHQ
DGAGLSSSTPQRNSGLVDVPPPTESPVLPSSVQRERGGQSDASRTCIKGTEGDKFKEKFV
AVNTLEDTQAVRAVAFHPSGAFYAVGSNSKTLRVCAYPDTLDTSGASKPPVVRFKRNKHH
KGSIYCVAWSPCGQLLATGSNDKYVKVLPFNTESCNATGPDLEFSMHDGTIRDLAFMEGP
ESGGSILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRF
WDLRVPSCVRVVGTAFHGSGSPVASVAVDPSGRLLATGQEDSACMLYDIRGGRMVQTYRP
HLSDVRSVRFSPGAHYLLTGSYDTKVITTDLQGDLTKQLPLTTVGEHSDKVIQCRWHPQH
LSFLSSSADRTVTLWTHNT
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaccctgcctgaattttatgtaaatcctgcagaaaatgtttgtttgatttgg
ctcatgcaggcatttgcacacaactttactattatattaaatttctatggttcaggaaat
tcagcatatacaaaaatattttttagatttttgtctttgacatgcatccttctcactctc
tgtccttctctcaggcaacttattctagatggacagtgggatgaggtgctgcaatttatt
cagcctctggagtgtatggagaagtttgacaggaaaagattccgctacattgtacttaag
cagaagtttctggaagctctctgtgtaaataatgccatgtcagctgaggatgagccacag
catctggagctaaccatgcaggaagctgtaaaatgccttcatgctttggaagagttctgt
ccctccaaagaggactacagcaaactctgccttctcctcaccctccctcgtcttaccagc
catgcagaattcagggattggaacccaagcacagcacgcgtacgctgttttgaggaggcc
tgtaccatggtggctgagttcatccctgctgaccgcaagttgagtgaagcaggtttccgg
gctggtgcagaccgcttgtttcaactgctggtcaagggcgtgctatatgagtgctgtgtt
gagttctgccagagcaaggccacaggcgaggagatcagtgaggctgaggtgctgctgggc
attgacgtgctctgtggcaatggcagcgacgagcctgacctgagtcttctgtcatggctg
cggaacctggtacctagtgtcttctcttgtgcctttgagcaaaaggtgctcaatgtgcat
gtggaccgggtggttaaaccagtacgagcggcccacgctgacctgctcacgccgctcgtc
agcaaactctcgccatgccctgcctctcctttgcgccgcccacaatcagctgacacttac
atgtcacgctcactcaacccagtgctagatggcctcgcctatggcctgtctggcctagag
agaagaggagggaccagagccagtgaggtggggaaggcatcacccatgtcacattcattt
gccaacttccaataccctggggggcagagtctgagccggagtctgatgatggaggagccg
caatgccaaagcatctttgaggagtcacctgagagctccagaactgaaactccctcagat
aaaatgatgagcttaagcagttcccagaactcccgcccagtctctgctccgggtcaggat
gcctcagcaacgacctctaccaagaagaatgagtttcgtgactcgatggaacagtatcag
gagtactataggcaacgcttacgtgtacagcagcacctggaacagaagcaacaccagagg
cagctataccaacagatgctactggagggtggagtccagcagcaggagacttcacctact
gccaagcacaacctcactgagaccttcctcaacaggtccattcagaagctggaggagctg
aatgttggaatggatgatctgggtgaggaagtgcaggctctctctctgcagtgtaatggt
gaagaaggaggagaagcaggaataacttcagggagtgccatagacacaacacttcatcaa
gatggggcagggcttagcagcagtacccctcagagaaacagtggactagtagatgttcca
ccacccactgagtcccctgtgctaccaagtagtgttcagagggagagaggaggacagagt
gatgccagcaggacatgcattaaaggaacagagggagataagttcaaggaaaagtttgta
gcagtgaatactttggaggatacacaagctgtgcgtgctgtggccttccacccatcaggg
gcgttctatgctgtgggctccaactccaaaaccctgcgggtctgcgcataccctgacaca
ctcgacaccagtggtgcatctaaacccccagtggtccgctttaagagaaataagcatcat
aaaggttctatttactgtgttgcgtggagcccctgcgggcagcttctggccactggctcc
aatgacaaatacgtcaaagtgctgcctttcaacactgaatcctgcaatgccaccggtcct
gatctggagttcagtatgcatgatggtactattcgagacctggccttcatggaagggcct
gagagtggaggatccatcttaatcagtgctggagcaggagactgtaacatctatactact
gactgtcagagaggacaggggcttcatgctctcagcggacacacaggccacatactgtca
ctgtacacatggggtggctggatgattgcatctggttcacaggataagactgtgcgtttc
tgggacctacgtgttcctagctgtgtgagagtcgtcgggacagctttccacgggtcaggt
agcccagtagcttcagtggcagtggatcccagtgggcgcctgctagccacaggccaggag
gacagtgcctgtatgctgtatgacatcagaggtgggaggatggtgcagacatatcgacca
cacttgagtgatgtgcgttcagtacgcttctcccctggagctcactacttgctcactggc
tcctatgacacaaaggttatcaccacagacctacaaggtgacctgacgaagcagctgcca
ttgactacagtaggagagcatagtgataaagtaatccagtgcaggtggcacccacagcac
ctctccttcctctcctcatctgctgatcgcacagtcactctctggacacacaacacatag
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