Ictalurus punctatus (channel catfish): 108261073
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Entry
108261073 CDS
T04658
Symbol
hapln1b
Name
(RefSeq) hyaluronan and proteoglycan link protein 1 isoform X1
KO
K06848
hyaluronan and proteoglycan link protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108261073 (hapln1b)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
108261073 (hapln1b)
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GFIT
Motif
Pfam:
Xlink
V-set
Ig_3
Ig_2
I-set
ig
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
108261073
NCBI-ProteinID:
XP_017317411
Ensembl:
ENSIPUG00000019341
UniProt:
A0A2D0QHU2
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Position
16:complement(8844452..8870533)
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AA seq
406 aa
AA seq
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MCQINIHMNARTQGFPWREQCPENHTSCTSLPSSHSESWHHLFPSEVTALKQYSKMNTLF
LLTFLSVCHAENFDQAYDLSPYRITYISENGPGLSVMTEQAKVVSYRGGNVTLPCTFQRN
PAFVPNPKMRIKWTKLTSDYLKEIDVFVAMGFHKKSYGSFHGRVHLRGATENDASLVISE
ITLEDYGRYKCEVIDSLEDGTAVVSLNLQGVVFPYFPPHGRYNLNFQDAEKACQDQDAIM
ASFEQLYDAWREGLDWCNAGWLSDGSVQYPITKPREPCGGKNTVPGIRNYGMQDKEKNRY
DVFCFTSKYKGRFYYLTPSLKMTYDEAVLACQKVGAQIAKVGQMYAAWKLLGYDRCDVGW
LADGSVRYPISRPRRRCSPTEAAVRFSGFPDKKHKLYGVYCFKGYN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaaattaacatccacatgaatgccaggacccaaggtttcccttggagggaacag
tgcccagagaatcacacttcctgcaccagcttgccttcttcccatagtgaatcctggcat
catctcttccccagtgaagtaacggcactaaagcaatatagcaagatgaacactctgttt
ctcctcaccttcctctccgtgtgccatgcagagaactttgaccaggcttacgatttgtca
ccttacaggatcacttacatctcagaaaatggccctggattgtctgttatgacagaacaa
gccaaagtagtgtcttaccgggggggtaatgtaacactgccatgcacgtttcaaaggaac
cccgcatttgtccccaatcctaaaatgaggataaagtggactaagttaacatcagattat
ctgaaagagattgatgtttttgtagctatgggtttccataagaagagctatggtagtttc
catggccgtgtgcatctacgtggtgccactgagaatgatgcgtcactggtcattagtgag
ataacattggaggactatgggagatacaaatgtgaggtgattgacagtctggaggatggc
actgcagtggtgtccctcaatctgcaaggtgtagtttttccgtatttcccacctcatggc
cgctacaacctgaacttccaagatgctgagaaagcctgtcaagaccaggatgccatcatg
gcctcctttgagcagctgtatgatgcttggagggaagggctagactggtgcaatgctggt
tggcttagtgatggatcagtgcagtacccaatcaccaaacctcgagagccatgtggaggg
aagaacacagtccctggcataaggaattatggaatgcaagacaaggaaaagaacagatat
gatgtcttctgtttcacatcaaagtacaaagggcgtttctactaccttacaccatctttg
aagatgacatatgatgaagcagtgctggcatgtcaaaaggttggtgctcagattgccaag
gtgggccaaatgtatgcagcatggaagctgctgggctatgatcgttgtgatgttggctgg
ctggctgatggaagtgtgcgctaccccatctcacgtccacgtcgccgctgtagccccaca
gaggctgctgtgcgcttctccggtttcccagacaagaaacacaaactctatggggtctac
tgcttcaaagggtacaactga
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