Ictalurus punctatus (channel catfish): 108261083
Help
Entry
108261083 CDS
T04658
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2 isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108261083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108261083
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108261083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
HIP1_clath_bdg
Rho_Binding
CC_Bre1
Clr5
Motif
Other DBs
NCBI-GeneID:
108261083
NCBI-ProteinID:
XP_017317434
Ensembl:
ENSIPUG00000019517
UniProt:
A0A2D0QGH7
LinkDB
All DBs
Position
6:complement(9229652..9262197)
Genome browser
AA seq
1779 aa
AA seq
DB search
MEKEPDVECGSSSCMGNGKSKLDTLSKDDLIKFAKKQMGAMQKLKSKCADLEEKIGALKA
LQGAPSNDSVIKELTERMDAVLLEKAETQQMLVLMRKENETLRNQREDSMEKMAALQQKL
DHIEKNHAEKIKLMEEQFETSETKYKEELEFLKKITSENEEIQRHKLQEDFNSKMETINQ
EYERKISDLDQNLELAKKEWITEKETLKDTHQIALQKTQAEIDHFQEMISRLNRQYEDEV
SYLEEQLEINAAQFDMERERLLLVQEELSEQIALKESYLQDVQEEEEDLNRRTQKPSELI
KALDSSVVQDPENEMDKLRLEFADLQSQNTMLKEELTFLTNVKTALEGDLKHLKKEFRME
REELEFKINELQMTKEEAEVCPEKEVNFMNVVETIRLEEHNQILQELKELHNAEMKELEA
HLISNKEREKEVIVQEAQDLQNTFKVLSEEKQAIASEYEHTKEILRNIEMELGDRTSEFV
KKYNTMKDQAAISVQELEEKLREKDSIIEKLKCFEQTQDNSEQKLQHKEDIVPEDKEVHK
FMMSDKENMVTLKEILMYIDKIRYECKDGGMDTAQITLQKLEDLAMTLEVALDEKKSLRN
CIDKLESQHSFSAHEKDQEVKNCNTSVEDLAVSNEEMAELQKDHQSALQERDALRKDLET
SEEKLFEAQKQICYILAQNYSAKIDEEQDISVLLNHLLSRVEEDKTTCIASNEEKAKLQK
DLQAVSDERNELKKIIETSERKLSDTQRHVCEILEQHYSVKIDSEEDISVLLNHLLSSIH
EEKKSYIMLNEEKLKQQRDLVIVVEEREDLKRYMETLERNLSDARRNICQMLKQNYSVKI
DSEEDISVLLNQLLSSIQEEKKSCIMLNEEKLKQQRDLVIVVEEREDLKRCMETLERKLS
DARRNVCEILEQDYSENINEEEDIPVLLKHLQSRVQEEKLILTQQLDEKTVQLSQLNQQA
ELSDDGNLQVQSDIENLQRDQNEQVEITGRLVGQEHEEPAVEGGAQETDDMKRLQQKLSE
KESIVAHLKEEISLLQESKLSAFNENMRQMESLEKEYKEKEERLNKFKAVAVKARKELDN
SKKEASRLKEELEALKSERDKMSDSMKAIIHGAEAYKNLMIDYDKQTELLDQEKDKLEAS
EKLVGDLTKRLHVAVEQHKQLSTEREDLMAHMETLQSNVRQLEAQALEMHKLKSSVERDL
EAERLLKEQKTKEHACAVKEVEELHTVLQKQKQQLQQTEHELEQLRKDAQQSTLLDMEMA
DYERLVRELNLQISDKDRLLEEQERQTQAQREREEKLNQEIESLKSLVDIGEEKTAKVKQ
LLVKAKKDLADAKKEEASQKILQSSLKGELEAIQQQLESYKIQCSELTADRHRLQEQLKS
VSDQHQRSVTAYQHQVTTLQNDLSSTKAEFESTKSDFDSYKVRVHNVLKQQKTKSSTESN
SDFSKQDRENMESMLEQLRSKLQESQLNAQSCNAELQQLQTEYDTLLERHNKMLQQTITK
EAELRERLLSLHSENVALKSEHSQSVVQLTAQTETLRSSFREQLHHLQDEHRSTVETLQH
QINRLETQLFQLQKEPATSAAQQQSKKPQSDKKLADLPLLELNMAREEGEGMETTETESV
STAGTPPPSLEQLLTSPDPKHEPFVWQVEPTKEELTNKLNTATRSMEHMNSLLHESEATN
AILMEQINLLKSEMRRLERNQEREKSVANLEYLKNVLLQFIFLHAGSEKQALLPVIHTML
QLSPEEKNKLSAIAHGEEEAAASRGSGWTSYLHSWSGIR
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaccggatgtggagtgtggcagctcctcatgtatgggcaatgggaaatct
aagctggacacattgtctaaagacgacctcattaaattcgcaaagaagcagatgggtgca
atgcagaaattaaagtctaagtgtgcagatttagaagagaaaattggagcactgaaggct
cttcaaggtgcgccttccaatgattctgtaataaaggagctgactgagagaatggatgct
gtattgcttgagaaagcagagactcaacagatgcttgtgttaatgcgcaaagaaaatgaa
acgctgagaaaccaaagagaagattcaatggagaagatggctgctctccagcagaaactg
gatcatattgaaaagaaccacgctgaaaagatcaaactaatggaagaacagtttgaaacc
tcagaaacaaaatacaaagaggaattggagtttttaaaaaaaataacaagtgaaaatgaa
gaaatccaaagacataaacttcaggaagactttaattctaaaatggaaacgattaatcaa
gaatatgagagaaagatatctgacttggatcagaatctggaattggctaaaaaagaatgg
atcactgagaaagaaactcttaaggacactcaccagatagctctccaaaaaacccaagca
gaaattgaccattttcaggagatgatttcaaggctgaacaggcagtatgaagatgaggtc
agttatctggaagaacagcttgaaatcaacgctgcacagttcgatatggagagggagagg
ctgttgctggtccaggaagagctatcagagcaaatagcacttaaagagagctacctccaa
gatgttcaagaggaagaagaagacctcaacagaaggactcaaaagccatcagaattgatt
aaggcattggattcctcagtagtacaagacccagagaatgaaatggacaaattgagatta
gaatttgcggatttacagtcacaaaacacaatgcttaaagaagagctcacctttctcact
aatgtgaagactgcgcttgagggtgatttgaaacatttaaagaaggagttcagaatggaa
agagaagagctggagttcaagattaatgaattgcaaatgaccaaagaggaagccgaggtt
tgccctgaaaaggaggttaatttcatgaacgtagtagaaactatccgtctcgaagaacat
aatcagattcttcaagaattaaaagagttacacaatgcagaaatgaaagaactagaggct
catcttatttccaataaagaacgtgaaaaagaagtgattgttcaagaggcacaagatctg
caaaacacatttaaagttctttctgaggagaaacaagctattgccagtgaatatgagcac
acaaaagaaattctgagaaacattgagatggagcttggagacagaacatctgagtttgta
aagaaatacaataccatgaaggatcaggcagcaatttcagttcaagagttagaggaaaag
ctcagggagaaggatagtattatagagaaactaaagtgcttcgagcaaacacaggataat
tcagagcaaaaactgcagcacaaggaagacattgtaccagaagacaaagaagtccacaag
ttcatgatgtcagacaaagagaatatggtgacacttaaagaaatattaatgtacatagac
aaaatacgatatgaatgtaaggatggaggtatggacactgcccagatcacacttcagaag
ttggaggacttggcaatgactttggaagttgccttggatgagaagaaaagtctgaggaat
tgtatagataagttggagagtcagcattctttctcagctcatgaaaaagatcaagaggtc
aagaattgcaatacttcagtagaggacttggctgtgtcaaatgaggaaatggctgaacta
caaaaagatcaccagtctgcattacaagagcgggatgctctaagaaaagatctggagact
agtgaagaaaaactttttgaggcacagaagcaaatctgttatatacttgctcagaactat
tctgccaaaatagatgaagagcaagacatctctgtactgctgaaccatcttctatccaga
gttgaagaagataaaacgacttgtattgcatctaatgaagaaaaggctaaactgcaaaaa
gacctgcaagcggtgtctgacgagaggaatgagctaaagaagattattgaaactagtgaa
agaaaactttctgatacacaaagacatgtctgtgaaatactggagcagcactactctgtg
aaaatagactcggaggaagacatctctgtactgctgaatcatcttctgtctagcattcac
gaggaaaaaaagagttacattatgttaaatgaggaaaagttgaaacaacaaagagacctg
gtgattgtggttgaagaaagggaggatctaaagaggtatatggaaacccttgaaagaaat
ctttctgatgcacggaggaacatctgtcaaatgctgaagcaaaactactctgtgaaaata
gactcggaggaagacatctctgtactgctgaaccaacttctgtctagcattcaggaggaa
aaaaagagttgcattatgttaaatgaggaaaagttgaaacaacaaagagacctggtgatt
gtggttgaagaaagggaggatctaaagaggtgtatggaaacccttgaaagaaaactttct
gatgcacggaggaatgtctgtgaaatactggagcaagactactctgagaacataaatgaa
gaagaggacatccctgtattgctgaagcatctccagtcaagagttcaggaagaaaaactg
atattaacccagcagttggatgaaaaaacagtacagttgtcacagctgaaccagcaagct
gagctcagtgacgacgggaacctacaagttcaatcagatattgaaaatttgcaaagggac
caaaatgagcaggttgaaataacagggaggttggtgggccaagaacatgaagaacctgca
gttgaaggtggtgctcaggaaactgatgacatgaaacggctccaacagaagttaagtgaa
aaagagtctatagtagcccatctaaaggaagaaatttcccttttacaggaatccaaacta
tctgcattcaatgagaatatgaggcaaatggaatctttagaaaaagaatacaaagagaaa
gaagaacgtttgaataaattcaaagctgtagctgtgaaagcaaggaaggaactggacaac
agcaaaaaagaggcatctagactaaaagaagaattggaggctttgaaatctgaaagagac
aaaatgtcagactctatgaaggccatcatccatggtgcagaggcctataagaatcttatg
atcgattatgacaagcaaactgagctgttggatcaagaaaaagataaactggaagcatca
gaaaaactggttggtgacttgaccaaacgtctacatgttgctgttgaacagcataagcaa
ctttctactgagagagaagatctgatggctcatatggagactctccaaagtaatgttcga
cagctggaagcacaggctcttgagatgcacaaactcaaatcttcagttgagagagacttg
gaagcagaaaggcttttaaaagagcaaaaaacaaaggagcatgcatgtgctgtgaaggaa
gttgaggaactccacactgtgctacagaaacagaaacaacagttgcagcagacggagcat
gagttggaacagcttaggaaggatgcccagcagagcactttgttggacatggagatggcg
gattatgagcggctggtcagagagctcaacctgcagatctctgacaaggacagactgctg
gaagagcaggaaagacaaacacaagctcagagagagagggaggagaaactgaaccaggaa
atagagtctttaaagtcacttgtggacattggagaggagaagaccgcaaaggttaagcag
ctgctggtgaaagctaagaaggatttggcagatgccaagaaagaagaagcatctcagaag
atcctgcagtcttctctgaaaggggaattagaggccattcaacaacagctggagagttac
aagattcagtgtagtgaactgactgcagatcggcacaggcttcaggagcagctaaagtca
gtgagtgatcaacatcagaggtcagtcactgcctaccagcaccaagtgacaactttacag
aatgatctgagctctacaaaggctgaatttgagtccacaaagtccgactttgatagctac
aaggtgcgagtacacaatgtgctcaagcagcagaaaactaagagctctactgaaagcaat
agtgatttttccaaacaggacagggagaacatggagtccatgctggagcagttgaggtcc
aaactgcaagaaagtcaacttaatgcacagagctgcaatgcagagctgcagcagcttcag
actgaatatgacacacttttggagcgtcacaacaaaatgttgcagcagaccatcaccaaa
gaggctgaactgagagagaggttactgtcattgcattcagagaatgtagcactaaaatcg
gagcacagccagtcagtagtgcagctaacggcacaaacagaaacattacgtagtagcttc
cgggagcagctacaccacttgcaggatgaacatcgcagcacggtagaaaccctgcagcac
cagatcaacaggctggagacccagcttttccagctgcaaaaggagcctgccacctctgct
gctcagcagcagagcaagaagccacagtcagacaagaagcttgcagatctgcctctgctt
gagttgaacatggcacgagaggaaggtgagggaatggagacaacagaaactgagtctgtc
tccacagcagggactcctccacccagtctcgagcagctcctcacttcacccgacccaaaa
catgagccctttgtgtggcaggtggagcccacaaaggaggagctaactaacaaactgaat
acagccactcgcagcatggaacacatgaacagcctgttacatgagagtgaagccaccaac
gccatcctcatggaacagatcaacctcttgaagagtgagatgcgtcgtctggagaggaat
caggagcgagagaaatcggttgcaaacctggagtatctgaaaaacgtgttgctgcagttt
atcttccttcatgctggcagtgagaagcaggcgctgctgcctgtcatacacacaatgcta
caactcagcccagaagagaagaacaaactttccgcaattgcgcacggtgaagaagaggct
gcagcgtcgagaggatctggttggacttcatatctccacagttggtctgggatcagataa
DBGET
integrated database retrieval system
