Ictalurus punctatus (channel catfish): 108261211
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Entry
108261211 CDS
T04658
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108261211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108261211
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108261211
Endosome - Golgi transport
Arf GTPase associated proteins
108261211
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108261211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_8
PH_6
PH_3
PH_9
Motif
Other DBs
NCBI-GeneID:
108261211
NCBI-ProteinID:
XP_053535164
UniProt:
A0A9F7REC1
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MLSPTAEVYQTVQEWLGGLRLEQYGPAFQEEGLGTVWECRELTACQLERLGVALPGHRKR
ILGSLQKLFLSEGGIGREDEEEGHRPVPKERTKFRVSAGTDLEVNCSRTAEPQDQKQNLT
TNNSVTHKKGPPPIPPRATQNCPPVPFSTVSVTAAMTTGGMSVTPSSLPSASMTKATQPR
PVPTPVPVRLQPRNVPPATRLQTGDQKPSPVSRSSVSPSPVSRSSVSPSPVSRSLVSRSS
VSPPPVSPSPVSRSSISPSPVSRSIVSKPAVSPPPVSPSPVSPSCSSSSSSTEQFHLYEQ
CSSPGHAELGVPPLPPKSYAVVTPREPKVTLPVTPPRRPPVPPRSTTATSNKATPLPRSL
TALSSSPADDICGLDATAQIKTRVETSQLAAVLAPCQRRLDSAGSSDSYEELETAKCTES
DPIEMADKNMFLPLPSLRKSRHSSLYSDDELLDEEDESVMENNSLRRHSWIEDYGRLSGS
QNSIYLPITAPPPKDDSTPQLTPVIKMGWLDKNPPQGSLIYQRRWVKVDADYLRYFDNDK
DVYSKRIIPTSSITTVAGVGDQKFEVVTNNRTFLFRAESDSERNDWVTVLQDIISSSRLK
PNSELTLNPCVTSEMKGYLELRGLRSKLYTIVCGDKVFLYKNAEDYKLGIGITSIDMNVG
NVKDMDRRAFDLTTPYRIFSFVAETDQLKDQWVEAMRNSIAEALSNYEVAEKIWAEPANQ
KCADCSATKPEWAAINLGVVFCKRCAGQHRSLGPSISKVRSLKMDRKVWTDDLIQLFLEL
GNERANQFWAANIPPSEALTSLSSSDARRRFISAKYREGKYRRYHPLFGNQQELNNALCI
NVQSNDVCETLALVFCGADVNCDTGNPEFPSPITLALHHGQNLQVEFLTQNRNIEIPRSE
VKLAMHTEHYMAPPSITHNGFLFKTASMARPITERKSKEEFSRRWCVLNDGHFNYYESDK
NATPNGGLKMKEIVCLAVSPPETHGYDHSFEIYSDAERLYLFGTDNPDSMKEWVKSIAKS
FIPACAEDLLQKDFERLGRLRYKDPLNLESWRLGWFCLEASTLHVCLEDSQSRESIQLQK
LLELSRDNEVLVLVERGRTLYIEGERKLDFHGWASAIQRAAGSSGDTLSQQQLTEADIPL
IVERCIHYVTQYGLASEGIYRKSGVNSRIASLLDTFKNDARSVWLKEGEHQVDDVSNVLK
RFFRDIEEGLFGPQSHNWLSTTALSDESRKISQYQLLFENLPQVNKATLRTLVNHLFCVQ
RFSELNQMNLHNLAIVFGPTLFQTDGQDYNAGRVVEDLIQHYITIFSVNEQQLKRQLDEI
TYIIKLRDNLNPKTGPASGDFICTVYLEEKKETAEQHVKIPATMTAAELVFEILDRRKIS
IKEKDYWCCFEVNEKEETERPLHYQERVLPILHSLGTDSNLVIKKHYAMEAMLIYLASKV
DVTKHGMLKFREERSLLGLSTGSFNDRYFMLNQNSLRLYKDVRSNRAEKEWPVKCLKVYQ
GIKKKLRPPTCWGLTVVYESEKPEKQERQQWYLCCDTQTEMREWLATFLSIQHAGLLWPA
EWLKSRPVPRSSPPLDSRLGSVSLIPLRGTESEMRNSVAAFSADSLALLRNL
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcccacagcagaagtctatcagaccgttcaagagtggctcggggggctccgc
cttgagcagtacggtccggccttccaggaggagggtctcggaactgtgtgggaatgcagg
gagctgactgcatgtcaactggagcgcttgggcgtggccttgccgggccaccggaagcgc
atcctggggagcctgcagaagctcttcctttcagaaggcgggattggtagagaggatgag
gaggaggggcataggcctgttccaaaggaaaggacaaaattccgtgtgtctgcagggact
gacttggaagtgaactgctcacgaactgccgaaccacaagatcagaaacagaacttaacc
actaataattctgtgacccacaagaaaggtccgcccccaatcccacctcgggcgactcag
aattgtcctccggtaccgttctcgactgtttccgttaccgcggcgatgaccactgggggc
atgtctgtgactcctagcagtcttccatctgcatctatgaccaaggcgactcagccgaga
cccgtgcccactccagttcctgttcggctccagccacggaacgtgcctcctgctacaaga
ctgcaaactggagatcagaagccatcacctgtctcaagatcatctgtctcaccatcacct
gtctcaagatcatctgtctcaccatcacctgtctcaagatcactcgtctcgagatcatcc
gtctcacccccacccgtctcaccatcacctgtctcaagatcatccatctcaccatcacct
gtctcaagatcaatcgtctcaaagccagccgtctcaccaccacccgtctcaccatcacct
gtctctccatcctgttcctcatcatcatcatcaacagaacagttccacctgtatgagcag
tgttcttcaccgggtcatgctgaattgggcgttcctcctctccctccaaagtcgtatgct
gtagtgactcccagagagcctaaagtcaccctgccagtcacgcccccccggagacccccc
gtaccgccccgcagcaccacggcaaccagcaataaagccacaccgctccccaggagcctg
acagcgctcagctcgtctccagcagatgatatctgtggtctggacgccacggcccaaata
aaaacccgtgtagaaacgtcacagctagcggccgtgttagcgccctgtcagagacggttg
gactctgcaggcagttcagacagctatgaggaactcgaaacggcaaagtgtacagagagt
gatcctatagaaatggcagataagaacatgttcctgccgcttcccagtctccgtaagtct
cggcacagcagcctgtacagtgatgatgagctcctggatgaagaagatgagtctgtgatg
gaaaataactctctcaggaggcactcgtggatcgaggattatggccgactctccggcagc
cagaacagcatctacctgcccatcactgctccacctcccaaagacgactccaccccccaa
ctcacgccggtcatcaaaatgggctggctggacaagaaccctccacaggggtccctgatc
tatcagaggcgttgggtcaaagtggacgctgattacctgcgatacttcgacaatgacaag
gatgtctattcgaagcggatcataccgacgtcctccatcacaacagtggccggtgtggga
gatcagaagtttgaggtggtcactaataatcgcacctttctgttccgggccgagagcgac
tcggagaggaatgattgggtgacggtgctacaggacatcatcagttcatctcgcctgaag
ccgaactctgagttgacccttaacccctgtgtgacctcagagatgaaaggttacctggag
ctccggggcctgcgctctaaactctacaccatagtgtgtggagacaaggtgttcctttac
aaaaacgctgaggattataagctgggtattgggatcacgtctatagatatgaatgtaggg
aatgtgaaggacatggacagaagagcgtttgacctgaccacaccttaccgcatattcagt
tttgtggcagaaactgaccaattgaaggaccagtgggtggaggcaatgaggaactccatc
gcagaggctctgtctaactatgaggttgcggagaagatatgggcagagccagctaatcag
aaatgtgctgactgtagcgccaccaaacccgagtgggcagctattaatctgggcgtggtc
ttctgcaagcgctgtgcaggacaacaccgcagtcttggtcccagcatatcaaaagtacgg
agcctcaaaatggacagaaaggtgtggacagatgatttaatacagctcttccttgagcta
ggcaacgagcgcgccaatcagttttgggcagctaatatcccgcccagcgaggccctgact
tcgctcagcagcagcgacgcgcgccgacgttttatctcggctaaataccgtgagggaaaa
taccgccgctaccacccactgttcggcaaccagcaagagctcaacaacgcgttgtgtatt
aacgtgcagtctaacgatgtgtgcgagactctcgccctcgtcttctgcggtgccgatgtg
aactgtgacacgggtaacccagaattccccagtcccatcaccctggccctgcaccacggc
cagaatctgcaggtggaattcctcactcagaaccgcaacatagagattccgaggtcagag
gtcaaactggccatgcacacagagcactacatggccccgccttccattacacacaacggc
ttcctttttaagaccgcctctatggcgcgaccaatcacagagcggaagagtaaggaagag
ttcagtaggaggtggtgtgtgctgaatgatggacattttaattattatgaaagtgataaa
aacgcgacgccaaacggaggactgaagatgaaagagatcgtctgtctggctgtcagtccc
cccgagacacacgggtacgatcactcttttgagatttattcagatgcagagcgtctctac
ctgtttgggacagacaatcccgactccatgaaggaatgggtcaagtccatcgccaagtcg
ttcatcccagcatgtgctgaagacctgctgcagaaggattttgagcggctcgggcgtctg
cgctataaagaccctctaaacctggagagctggaggctgggctggttctgtctcgaagcg
tccacgctgcacgtgtgtttggaagacagtcagagccgcgagagcatccagcttcagaaa
cttctggaactctcgagggataatgaagttctggtgctcgtggagcggggcaggactctg
tacattgagggagagaggaagttggattttcatggctgggcgtcagccatccagagggct
gctgggagttcaggagatacgctgagtcaacagcaactcactgaggctgatataccgctc
atagtggagcgctgtatacattacgtcacgcagtatggcctcgcgtcagaaggtatttac
cgtaagagcggagtgaacagtaggatcgcctccctgctggacaccttcaagaacgatgct
cgctccgtgtggcttaaagagggagagcaccaagtggacgacgtgtccaacgtcctcaag
aggttcttcagggacatcgaagagggactgtttggtccacaatcacacaactggctcagc
actacggctctttcagatgaaagcaggaagatctctcagtatcaacttctttttgaaaat
ctgcctcaagttaacaaagccacactacgcacactggtcaatcacttattctgcgtgcag
cggttttcagaactcaaccaaatgaacctccataacctggcaatagtttttgggccgacg
cttttccagacagacggtcaagactacaatgcaggacgtgtagtggaggacctcatacag
cactacatcaccattttcagcgttaatgaacagcagttaaagagacagcttgatgagatc
acctacatcattaagttacgagataacctcaaccctaaaacaggaccggccagtggagat
tttatctgcacagtatatctggaggagaagaaggagacagctgagcagcatgtgaagatc
ccggccacgatgacggcggctgagctggtcttcgagatcctggaccgcaggaagatcagc
atcaaggagaaggactactggtgctgcttcgaggtcaatgagaaagaggagacggagcgt
cctctgcactatcaggagcgagtgttgccgatcctgcacagtttggggacagacagtaac
ctggtcatcaaaaagcactatgccatggaggccatgctcatctacctggccagtaaagtg
gatgtgactaaacatggcatgctgaagtttagagaggagcgcagtctgcttggtctgagt
acaggaagcttcaatgatcgatacttcatgctcaaccagaactcactacgactctacaaa
gacgtccggagtaatcgggcggagaaggagtggcctgtgaagtgtctgaaagtctatcag
gggataaagaagaagctccgccccccgacatgttggggactgaccgtggtgtatgaaagt
gagaagcctgagaaacaggagagacagcagtggtatctgtgctgtgacactcagacagag
atgagggagtggcttgctacgtttctcagcatacagcatgcgggtctcctgtggccggcg
gagtggttgaagtcgcgtcctgtccctcgttcctctcctccgctggattctcgtctcggt
agtgtgtcgctaattcctctgcgtggtactgagagtgagatgaggaacagcgtggctgct
ttctccgccgattccctcgccctgttaagaaacctatga
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integrated database retrieval system
