Ictalurus punctatus (channel catfish): 108261282
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Entry
108261282 CDS
T04658
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12 isoform X1
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
LRR_4
LRR_1
PYRIN
LRR_8
Motif
Other DBs
NCBI-GeneID:
108261282
NCBI-ProteinID:
XP_053535042
UniProt:
A0A9F7R2S6
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MTSNMSVSGEQDLKRDERMMEGKRSDSPEPSCVSMKSDASMGQPFTFRDGASSADVRPQQ
KKSNISRNQLDSIFKELEHKVITLIKNELKRFRKLLGTDYPACTEREVQDEEDLHSVRDG
ALKITLHVLKNMNHTDLANTLHNKSVASVYQTKLKSSLREKFKRINEGISQHGSSALLNE
IYTELYITEGWSGDVNNEHEVRQIETASRRPATQETPIKCNDLFKVKSIRSVLTKGVAGI
GKTVSVQKFILDWAEGKANQDVTFMFPLPFRELNLMKKEHLSLMDLLHHFFPEIRKLQLI
DSYKVVLIFDGLDECRLPLNFQKNERLCDVTESASVDVLLTNLIKGNLLPSALLWITSRP
GAASQIPPDCVDQVTEVRGFSDPQKEEYFRKRISDQSLANKIIRHMQSSRSLYIMCHIPV
FCWISATVLERMLGEAESGEIPKTLTQMFTHFLIFQIKHKDQKYHQKCDPDPQQTRESIL
ALGKLAFQQLEKGNLIFYEEDLRECGIDVREVSVYSGVCTQIFREEFGLHLGKVFSFVHL
SVQEFLAALYAFFCFIFRKTNVLVEQSTRLFNFFRKSDMSDLLRSAVDKALQSENGHLDL
FLRFLLGLSLESNQTLLRGLMPQTGSSSHSKQETVEYIKEKIRENPSPEKSINLFHCLNE
LNDHSLVQEVQTYLNRRDYSRLSGTRLSPAQWSALVFVLLNSDQELDVFNLSKYDRSEEC
LLKLLPVVKDSRRADLCGCDLTEESCRVLSSVLRSNSSRLRELNLSVNNLQDSGVKLLSA
GLENPHCTLEILRLWECDLTEESCRVLSSVLRSNSSRLRELNLSYNNLQDSGVKLLSAGL
ENPHCTLEKLSLRVCDLTEESCRVLSSVLRSNSSRLRELDLSHNNLQDSGVKLLSAGLEN
PHCTLETLRMCDCGITDEGCAALASALRSNSSSHLRELNLNCNNPGESGVKLLSDLLKDP
HCNLETLHIKDNTLTRTGV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaacatgagtgtgtctggagaacaggacttaaagagagacgagagaatgatg
gagggaaagagatcagactcaccagaacccagctgtgtgtccatgaagagtgacgcgtca
atgggacagccatttaccttcagagacggagccagttctgctgatgtgagaccacaacag
aagaaatcaaacatcagcagaaatcagttggactccatattcaaggagctggaacacaag
gtcatcactctgataaagaatgagctgaagaggtttaggaagctcctgggtacagattac
ccagcatgcactgagagggaggtgcaggatgaggaggatctgcacagtgtcagagacgga
gcgctgaagatcacactgcacgtcctgaagaacatgaaccacacagatctcgctaacacg
ctgcacaacaagtctgtggcctctgtgtatcagacaaagctgaaatccagcctgagagag
aagtttaaaagaattaatgaaggaatctcacagcatggaagctcagcacttctgaatgag
atctatacagagctctacatcacagagggttggagtggagatgtcaataatgaacatgag
gtgagacagattgagacagcgtccaggagaccagcaacacaggagacacccatcaaatgt
aatgatctctttaaagtcaagtccatcagaagtgtgctgactaaaggagttgctggaatt
ggaaaaacagtctctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcag
gacgtcaccttcatgtttccacttccctttagagagctgaatctgatgaagaaggaacat
ctcagtctgatggatcttcttcatcattttttccctgaaataagaaaactacaattaata
gactcctacaaagtggtgttgatctttgatggtctggatgagtgtcgacttcctctaaat
ttccagaagaatgagagattgtgtgatgtgacagagtcagcctcagtggatgtgctgctg
acgaacctcatcaaggggaatctgcttccctctgctctcctctggataacctctcgacca
ggagcagccagtcagatccctcctgactgtgtagaccaggtaacagaggtacgagggttc
agtgatcctcagaaagaggagtacttcaggaagaggatcagtgatcagagcctagccaat
aaaatcatcagacacatgcagtcttcaagaagcctctacatcatgtgccacatcccagtc
ttctgctggatctcagccactgttctagagagaatgttgggtgaagcagagagtggagag
atccccaagactctgactcaaatgttcacacacttcctgatctttcagatcaaacacaag
gaccaaaagtaccatcagaaatgtgaccctgatcctcagcagaccagagagagtatcctg
gcactgggaaaactggctttccaacagctggagaaaggaaacctgatcttctatgaggaa
gacctgagagagtgtggcattgatgtgagagaagtgtcggtgtactcaggagtgtgtacc
caaatcttcagagaggagtttgggcttcacctggggaaggtgttcagctttgtacatctg
agtgttcaggagtttctggctgctttatatgcatttttctgctttatttttagaaagaca
aatgtgttagtggaacaaagcactagacttttcaatttcttcagaaagtcagacatgtct
gatctcctcaggagcgcagtggacaaggccctacagagtgagaacggacacctggacctg
ttcctccgcttccttctgggtctctcactggagtccaatcagactctcttacgaggctta
atgccacagacaggaagcagctctcacagcaaacaggaaacagtcgagtacatcaaggag
aagatcagggagaatccatctccagagaaatccatcaatctgttccactgtctgaatgaa
ctgaatgatcattccctagtgcaggaagtacagacttacctgaacagaagagattacagt
cgtctcagtggaaccagactctctcctgctcagtggtcagctctggtgtttgtgttactg
aactcagaccaggagctggatgtgtttaatttgagtaaatatgaccgatcagaggaatgt
cttctgaagctgctgccagtggtcaaagactccagaagagctgatctgtgtgggtgtgat
ctgacagaggaaagctgtagagttctgtcctcagttctcagatcaaactcctccagactg
agagaactgaacctgagtgtcaataacctgcaggattcaggagtgaagctgctctctgct
ggactggagaatccacactgtacactggagatactgaggctttgggagtgtgatctgaca
gaggaaagctgtagagttctgtcctcagttctcagatcaaactcctccagactgagagaa
ctgaacctgagttacaataacctgcaggattcaggagtgaagctgctctctgctggactg
gagaatccacactgtacactggagaaactgagtcttcgtgtgtgtgatctgacagaggaa
agctgtagagttctgtcctcagttctcagatcaaactcctccagactgagagaactggac
ctgagtcacaataacctgcaggattcaggagtgaagctgctctctgctggactggagaat
ccacactgtaccctggagacactgaggatgtgtgactgcggtattacagatgaaggttgt
gctgccctggcttctgctctgaggtcaaactcctcatcacacctgagagaactgaatctg
aactgtaataatccaggagaatcaggagtgaagctgctctctgatctactgaaggatcca
cactgtaacctggagacactacacattaaggataatacactcaccaggactggcgtatga
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