Ictalurus punctatus (channel catfish): 108261555
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Entry
108261555 CDS
T04658
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108261555
CD molecules [BR:
ipu04090
]
Proteins
108261555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
108261555
NCBI-ProteinID:
XP_053544117
UniProt:
A0A9F7RNZ0
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All DBs
Position
19:27217965..27221171
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AA seq
679 aa
AA seq
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MKILQDSCRVLFVRVLCLIENLHNIYTIKLNTGHRMSRLTAGPHRCSGRVEVLHGRTWFT
VCDADFDQQDAEVVCQELSCGIPVKVRGSAAFGRGEGQVWTEELQCRGNESEITLCPTSS
SLKHSTCSHYNDVGLICSGHTGARLVNGPDSCSGQVELQYLSEWGTVCAVGWDMRAADVL
CAQLGCGSAVAVVEVDWFGEGSGHIWADVFDCQGKDTHLSQCNISSWSRAACSHKHDAGV
ICNGSSVAFHEGRVRLSGGSECQGEVEIYFRQDWRRVLLDSWSLSEASVLCRQLGCGSVL
NYRSSPSTTEHKHMCVTGFSCSGSEAHLGNCSSAQPVNCSSGEQLYITCSDPSSIRLVGS
GGDCAGRLEVFHSGSWGTVCDDSWDIEDAQVVCRQLQCGVALNTHIPAWFGPGTGSIWLN
EVECEGNETSLWNCRFQLCEEGECGHQEDVGVVCSEFKEIRLTEGCEGNLEVFYNGTWGN
VCYNKMEMKLETADMVCRELNCGRGESLDSARARVESAPNWMDHVKCRKHDSNLLKCPSS
PWGQNRCDNGDEVVHITCTEHWSLRLSGGEGSCSGRLEVYHNATWGSVCDDQWNIRNAQV
VCRQLGCGSALSADRNVSSGPGERTIWLNRVKCRGDEIHLWDCHHSLKKHTDCSPAGVTC
ADISLKAQTLNCNTLISSS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgcaggattcctgtagggttttgtttgtaagggtactctgtcttattgaa
aatctgcacaatatttacacaattaaattaaacacaggtcacagaatgtcgagactcact
gctggtcctcaccggtgctctgggagagtggaggtgcttcatggacgtacctggttcaca
gtgtgtgatgctgactttgaccagcaggatgcagaggttgtgtgtcaagagctgagctgt
gggattcctgtgaaagtgcggggatcagctgcttttggccgaggggagggtcaggtgtgg
acagaggagcttcagtgtagaggaaatgaatctgagattaccttatgtccaacatcatct
tcactcaaacactcaacctgctcccattacaacgatgtgggattaatatgttctggtcac
acaggggcgcggctggtgaacggaccggactcctgctctggtcaagtggagctccagtac
ctcagtgagtggggcacagtttgtgctgtaggctgggatatgagagctgcagatgttctc
tgtgcacagctgggttgtgggagtgctgtagctgtggtggaggtggactggtttggggag
gggagtggccacatctgggctgatgtgtttgactgtcaggggaaggacacacacctatca
caatgtaacatctcatcatggagtcgagctgcatgctctcataaacacgatgctggagtc
atctgtaatggatcatccgtggcgtttcatgaggggcgagtgcggttgtctggagggagc
gagtgtcagggggaggtggagatttatttcaggcaggactggaggagagttctcctggac
tcgtggagtctgtctgaggcgtctgtgctctgcagacagctgggctgtggctccgtgctg
aactaccgctcctctccatccaccactgaacacaaacacatgtgtgtaacgggtttcagc
tgctctgggagtgaagctcatctggggaactgcagcagtgcacaacctgtcaactgcagc
tccggggaacagctgtacatcacctgctcagaccccagctccatcaggctggttggttct
gggggagactgtgcaggaaggctggaggttttccacagcggctcgtgggggacagtgtgt
gatgactcgtgggatattgaggatgcgcaagtggtgtgcagacagctgcagtgtggagtg
gccctcaatacccacataccagcctggtttggtcctggaactgggtccatatggctgaat
gaggtggagtgtgaggggaacgagacgtccctgtggaactgcagatttcagctgtgtgaa
gagggtgaatgtggacaccaggaggacgtaggagtcgtgtgctcagagtttaaagagatc
cgactcacggagggctgtgaggggaatctggaagtgttctacaatggaacctggggtaat
gtgtgttacaacaagatggagatgaagttagaaacagcagatatggtgtgtcgagagctg
aactgtggaagaggcgagagtttggactcggccagagcgagagtcgaatctgctcctaac
tggatggatcatgtgaaatgtaggaaacacgactctaatctgttgaagtgtccatcttca
ccctggggacagaacagatgtgataatggtgatgaggtggttcatattacctgcacagag
cactggtctctcaggctgagtggaggagagggaagctgctctgggaggttggaggtgtat
cataacgctacgtggggctccgtttgtgatgatcagtggaacatcaggaacgctcaggtg
gtgtgcagacagctgggctgtgggtcggcgctgagtgctgataggaatgttagttctggt
cctggtgaaaggactatctggctgaacagagtgaagtgtcgaggggatgagattcacctg
tgggactgtcatcattccctgaagaaacacactgactgctctcctgctggagtcacctgt
gcagatattagtttgaaagctcagaccctaaactgtaatacactgatcagcagctcataa
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