Ictalurus punctatus (channel catfish): 108261658
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Entry
108261658 CDS
T04658
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108261658
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108261658
04082 Neuroactive ligand signaling
108261658
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108261658
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108261658
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Reticulon
Motif
Other DBs
NCBI-GeneID:
108261658
NCBI-ProteinID:
XP_053543456
UniProt:
A0A9F7RJH0
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All DBs
Position
17:25635341..25722133
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AA seq
1171 aa
AA seq
DB search
MSVMLCRLVAYLSVSLHALISPCQLHPQPCGILAQIGHTIRLGAVLPSHQPSRVRAALNR
ALVHARNWPHAPLLPYNLSLEVVWARAAHADPESVFRCVCQDVVVRGVSAVLAFPQSQHE
LVQVEFISAFLEIPFISIIEEGEALQTQNRFHLQMLTHVPASGLAELLLSVLVRAGWQGG
AAVMCPGGGDTGVLEHLHQQGRAGLNGSRWHLWETLDLSSHWASWSSEEEANNNNNNQFI
LHKKPEDVSQEVTDKEQEMSELLSQLMNRTPSALHSSVVVFGSDPECVSLVLRGATRLGH
TLWVLGLPLNPDALSALGSPKGLLAYGQTERRPLSSYIGDALQLVGRAVSDASVVRPDLA
LIQNMVNCFDKPNKHELLSSGHYLSRFLSNMSFEGLTGHVTVHPSISIVSTTHGFHVWSL
QRDALGQPSWATVAEWHSGHLEMDKKSIWPDLMKHELDQETTVKPGRRWHHGFPVSGHRL
RVVTLVEHPFVFTRKADEDGRCPAGQLCLDPRTNNSDILNRLFTDLEQKNSSSLPGDMIK
CCYGYCVDLLEKLAEDMGFDFELYIVGDGKYGAWKNGQWTGLVGDLLSGAADMAVTSFSI
NSARSKVMDFTSPFFSTSLAILVRSKDTAAPIGAFMWPLHWSMWVGIFITLHITALFLTL
YEWKSPFGMTPHGRNRVRVFSYSSALNLCYAVLFGRTVASKTPKCWTGRFLMNLWAIFCL
LVLSSYTANLAAVMVGEKIFEEVSGIHDAKLQHPSLGFRFGTVHESSAEDYMKKSFPEVH
EYMRHFNQPTTPQGVATLKTDPPQLDAFIMDKALLDYEVSIDAECKLLTVGKPFAIEGYG
IGLPQHSPLTRNFSEVVNGYKSDGFMDLLHDKWYRATPCGKRSFAVTETLQMGIQHFSGL
FVLLCVGVVCSLLTLLSEHTFYSFILPHLHNQHRLKYWLHTSQKIHRALNTVCDEKKTET
VNKNTNIPLCLSEGCQLHCLPSADPSISSSTYNRWNDGSPEATSSELKDANHKRVHFDLG
SERGIKSPDAFMEGPDVGIKRSDEAMCDLLVPDLGTRRLDGGIKKLLRSQRGIRGLVGSP
PSQLCANGDAASGLSLVLLPPACPASSRSSLWEGELQEIEGKIEEFRGNLRAALARRAEL
QRNLEKERERQRQTERDSSCLSISTDMNRRR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatgctctgcaggctcgtggcgtatctctccgtctctctgcacgcgctcatc
tccccgtgccagctccatcctcagccctgtggcatcctcgcgcagatcggacacaccatc
cgcctcggcgccgtcctgccctcccatcagccctcgcgcgtccgagccgccctgaaccgc
gcgctcgttcatgccagaaactggccccacgcgccgctcttaccctacaacctgagcctg
gaggtggtgtgggcgcgagcggcgcacgcggacccggagtcggtgttcaggtgcgtgtgt
caggacgtggtggtgcgcggggtctcggccgtgctcgcgttcccgcagagccagcacgag
ctcgtgcaggtggagttcatttccgcttttctggagatcccgttcatcagcatcatcgag
gaaggtgaagcgcttcagacgcagaaccggttccacctgcagatgctgactcatgtccct
gcatctggattggctgagctgcttctgtcggttctggtgcgagcggggtggcagggcggg
gcggcggtgatgtgcccaggagggggcgacaccggggtgttggaacacctccaccagcag
gggcgggccgggctaaacggctcacgctggcacctgtgggaaaccctcgacctctccagc
cactgggcgtcttggtcaagcgaggaggaagctaataataacaacaacaaccaatttatt
ttacataaaaagcctgaggacgtgtcacaggaagttactgataaggaacaggaaatgagc
gagctcctctcacagctcatgaaccgaaccccgtctgctctgcattccagcgtggtcgtg
tttgggtcagacccggagtgtgtgagcttggttttgcgtggagcgacgcgactcggacac
acactctgggttctaggactgcccctgaacccggacgctttaagtgcccttgggtcccca
aaaggcctgctggcatacggacagacggagcgccggccgctcagctcctacatcggcgac
gcgctgcagctggtgggccgagccgtgtctgacgccagcgtggtgcgacccgacctggcg
ctcatccagaacatggtcaactgcttcgacaagcccaataaacacgagctgctgtcatcc
ggacactacctgtccagattcctctccaacatgtcgttcgagggcctgacaggtcatgtc
actgtgcatccctccatctctatcgtttccaccacacacgggttccacgtttggagcctt
cagagggacgctctaggtcagccaagctgggccacggtggctgaatggcattctggacac
ttggagatggataagaagagtatttggccggatttaatgaaacatgagctggatcaggag
acgaccgtcaagcccggcagacgctggcatcacggatttcctgtttctgggcacagactc
cgtgttgtgactttagtggagcatccgtttgtttttacccgcaaggctgatgaagatggc
cgatgcccagctggacagctttgtctggaccctcgaaccaacaactcagacatcctgaac
cgtcttttcacagatctggagcagaaaaacagcagctcgttaccaggtgacatgatcaaa
tgctgctacggatactgcgtcgacctgctggagaagctcgctgaggatatggggtttgat
tttgaactctacatcgtaggcgacggaaagtacggagcgtggaaaaacgggcagtggacg
ggactggtgggagacttgctgagcggcgcagccgacatggccgtcacgagcttcagcatc
aattcagcgcggagcaaagtgatggacttcaccagcccgttcttctccaccagcttggcc
atcctggtgcgcagtaaggacacggccgcgcccatcggagccttcatgtggccgttacac
tggtccatgtgggtcgggatcttcatcacgctccacatcaccgcacttttcctcacgctc
tacgagtggaagagtccgtttggaatgacgccgcatggacgaaaccgggtccgagtcttt
tcctattcttctgcgctcaacctgtgttacgccgtgctgttcggacgaactgtcgcgagc
aagacgccaaaatgctggaccggacgattcctcatgaacctctgggccattttctgcctg
ctggtgctctccagctacaccgcgaacctagccgctgtgatggtgggcgagaaaatattc
gaggaggtttcgggaattcacgacgccaagctccagcatccgtctctggggttccgcttt
ggtacggtccacgagagcagcgccgaagactacatgaagaagagttttcctgaagtgcac
gagtacatgagacacttcaaccagcccaccacaccacagggggtcgctacactcaagaca
gatcctcctcaactcgacgctttcatcatggataaagctctgcttgactacgaggtctcc
attgatgctgagtgtaagcttctgacggtgggaaaaccgttcgctatcgaaggttatggt
attggattaccccagcattccccgctgacccggaacttttcggaggtcgtgaacggttat
aagtcggacggttttatggatctgctgcatgataaatggtatcgggccactccctgcgga
aaacgaagcttcgccgtcaccgagactctgcagatgggtatccagcacttctctggactc
tttgtgttgttgtgtgttggtgttgtgtgttcattactcacactgctgagtgaacacacc
ttctacagcttcatcttaccgcacctgcacaaccaacacagactgaagtactggctccac
accagccagaagatccaccgagctttaaacacggtgtgtgatgagaagaagacagaaacc
gtgaacaaaaacacaaacattcccttgtgtctgtcagaaggctgtcagctccactgtctg
ccctccgctgatccctccatctcctcctccacctacaacaggtggaacgacggaagccct
gaagctacgagcagcgaactcaaagatgctaatcacaagcgtgtccacttcgacctgggg
tcagagcgaggcattaagagccctgacgctttcatggaaggtccagacgtgggcatcaag
cgctcagatgaggccatgtgtgacctgctggtgccggatctgggcactaggagattggat
gggggcattaagaagctgttgaggtcacagcggggtattagggggttagtgggcagccct
ccttctcagctgtgtgccaacggagatgcagcgtcaggactcagcctggttctcctgccc
cctgcctgccccgcctcatctcgctcctctctgtgggaaggggagcttcaggagatcgag
ggcaaaatcgaagaattccgggggaacctgcgggcggcgctggcacggagagccgagctc
cagaggaacctggagaaagagagagagagacagagacagacggagagagacagcagctgt
ctctccatcagcacagacatgaacaggaggaggtga
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