Ictalurus punctatus (channel catfish): 108262721
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Entry
108262721 CDS
T04658
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108262721
Cilium and associated proteins [BR:
ipu03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
108262721
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
CFAP43_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
DUF5423
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108262721
NCBI-ProteinID:
XP_017318515
Ensembl:
ENSIPUG00000020810
UniProt:
A0A2D0QM28
LinkDB
All DBs
Position
3:complement(23007255..23028290)
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AA seq
1654 aa
AA seq
DB search
MDVSGGLEVRWVQGFTSSKVVFLDEKTACYPCGNYITFLNVETKMRKVLQSPGHGIGGFT
ANGLCKTLAFSEQKRFPAIFVYTYPELSLRCELKGTAKLAYAALALSDTAPYLVSCSSLP
DYTITVWNLERGISICSNRLAEEDATTLLFNPVSWQQICALNSKSLTVWNIERSNNSHIM
KPSVIDLPAMDGSVVEQGVDTSYIPTGKLTYSGPQMPISDIAGLTGDRADNILPLMQVKP
RLCPSTICWSVSSDLYVGTKEGFLLLVNTESLLVSILYNPHIKQSPSDCSESLVIQEGSF
QILALHSKGMFATGPDGVLQTLQIKGSQVEVVETLALVEPVSSLCFSPDDKTLLLSSTTG
RIYKYNPGLKNEVIKILDVLCGDFIAAAPVYTEKNLCVSVRESGELQLWSLEDGDCIASI
SLQTNVTCLACCPIAQYVAVGAVTGHVLFVDLTRAQKPRLVHTVHLYHVPVEHLVFDQGA
NFLITGAFSSHIFLLDARPSKAFEIIGYTDAMGATVSLSTQYQKESKQVDVLVLCNSENK
NRTDKEHKEGNLLMLLSVSTQQISDTANCVDPHGRLQEQIIQTCVYETPYSLSSCILGTK
TIFGYCHQKKILQRFELSQSVYKPFSNQKAVRLSPEKEVEGHPLGPALLHLSPHQNWLAS
VGRDGQLCIHDITTLEKYVQKQCHSWWLGGIRSVSFTPDSQILITTGLRDGSLVCSRLSL
KMAVATEYGLSMVASFEDKMSQENPILSDMADWEPPSHTVEVINRGQLTNDITDKNDGFN
SLPSTTSTWLDNKRNTVLKEESQQFAETRKSLKKSVAELRDTIQTMMQENEKLPEMEKLE
QLEFNLDMEEQQRLQAEGEQEVTKVRKEIELENLAKCYLHDIFKKKYWDSMNVKGKAIKG
FHSGYEVNNFPMKERTAKELEELYRVEAIRKIEQADTSLQQDILENNKAPLERDEDEEDK
GHEVESLALTGSLSAQYGGSNPHLYSQFSLRTRDQKLNQIILLQDVIYKVKTAFNTEFEA
VYKQKEQEISRIRDKNKRITEIMNKLELQETLWEPTLTDNERPERALAVSDSEIKVEKYL
TPAQRQREEEQRKEEEQRRLADKGDNIKERALDDMMSGVLEVKKEDILRLEVPPPEFIVK
PELQWTEEERRSYKEHERKVKELSEEQEKYRKTLEAEMKKLQASIKDATQAFDETLSKLF
ERKVKSEMVLYQEELKIANLFHSLLIEEEMMNREEELIYRLEKAQIVKNQIGKTLNNHRE
EVEAFRETYDNTVAEDKLLDIGFRKELFDVPGHIVDQLYKLYKRRPRIQIMRTQTDTDSL
LKESPMLSRAAAEGLSQMMKAMEELDAPQNMPEGLDPIVWERFCLVRRTKMESEQKVKMK
ALTLAEMQTFLQKRTEEEENAQMEIKNLFDHLNCLREERSRFCLDVMVQILLKQGQVEVD
TGDFNADYSDSLLLQRYVVEDLNNTIRALGEQKIASMVECKNFHKGIIQQEWEHKRMSMQ
IEDLKNKARDIQMLHVSQELQEYLTETDHDNRMSKKVSTLEKTVTLQEKTYTKNVESCKK
QIKELNRQIKMKKENNEALDVQLTNMQVTVAERRNIYETSAMEEIQEREAKQRYQNILQR
KNLVDLAKAQDMDIAILSAELECMRRKTFPALSQ
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcgggtggtttggaagtgaggtgggtgcagggcttcaccagcagcaaagtt
gtatttctggatgaaaaaacagcctgttacccttgtggaaattacatcaccttcctcaat
gtggagacaaaaatgagaaaagtgcttcaaagccctggccatggcatcgggggcttcaca
gcaaatggactttgtaaaactcttgcattttctgagcagaaacgttttccagccattttt
gtgtacacatatcctgagcttagcctgagatgtgagcttaaaggcacagctaaactggcc
tacgcagccctcgcactgagtgacaccgctccatatttagtcagctgttcatctttacct
gattacaccatcacagtatggaacttggaaaggggaatttcaatttgtagcaatcgactg
gctgaagaggatgccacaaccctacttttcaatccagtgagctggcagcaaatttgtgct
ttgaattcaaaatcactaacagtgtggaatattgagagaagtaacaactcccatattatg
aaacccagtgttattgatctccctgccatggatggctctgtagttgagcagggggttgac
acttcttacatccccactgggaagctgacatactctggccctcagatgcccatttcagat
attgcagggctgaccggtgacagagcagataacattttgcctctgatgcaagtgaagcct
cgactctgcccaagtaccatctgctggtcagtttcttcagatctatatgttgggactaaa
gaaggcttcctgctgctagtaaacactgaaagtctccttgtctctatcttgtacaaccct
catattaagcaaagcccctcagattgcagtgagagcctggtgattcaagaaggcagtttt
cagatattggcactacacagtaaaggaatgtttgctacaggacctgatggtgttttgcaa
acccttcagattaaaggaagccaagtggaagtggtggaaactttggctttagtggaacca
gtctcaagtttgtgcttttcacctgacgataaaacattgctgctgtcctcaaccactgga
cgcatttacaagtacaatccagggcttaaaaatgaagtcatcaaaatcctggatgtgttg
tgtggagactttatcgctgctgccccagtatatactgaaaagaacctctgtgtgtcagtc
agagagtctggggagttgcagctgtggtcactggaggatggagattgcattgcatccatc
tcactacagacaaatgtgacctgcttggcatgttgcccaatagcacagtatgttgctgtg
ggagcagtaacaggccatgtcctgtttgtagatctgaccagagcacagaaacctcgactg
gttcacactgtccatctgtaccatgtgcctgtggagcatttagttttcgaccaaggggca
aatttcttgattacaggagcattcagttcacacatatttttgctggatgcaagaccatct
aaagcatttgagattattggatacactgacgctatgggtgccaccgtgagtctgtcaacc
cagtaccagaaagagagcaagcaggtggatgtgctggtgctctgtaatagtgagaacaag
aacaggacagacaaggaacataaggaagggaatctgttaatgttgctgtcagtgtctaca
cagcagatctcagatacagcaaattgtgtggacccccatggccgcctgcaagaacaaatt
attcaaacctgtgtgtatgagaccccatactctctttcctcatgcattctgggtaccaaa
acaatctttggttattgtcaccagaagaaaattctgcagagatttgaactatcgcagagt
gtgtataaaccattcagcaaccagaaagcagttagactgagtccagagaaggaggtagag
ggtcatcctcttggccctgcgttactgcatctctcacctcatcagaactggctggcgtct
gtcggcagagacgggcagctttgcatccatgacatcaccactctggagaagtatgtgcaa
aagcaatgccactcttggtggttgggaggaattcgctctgtgtctttcacccctgacagt
cagattcttatcactaccggcctccgagatggctctctggtctgtagcaggctcagttta
aagatggctgtagctaccgagtatggcctgtctatggtggcctcctttgaagataaaatg
tcccaagagaaccctatcctcagtgacatggctgactgggaaccgccgtcacatacagta
gaggtcattaacaggggccaactaacaaatgatataacagacaagaatgatggttttaac
agtctaccttctacaacttccacatggctggataataaacgaaatactgtactcaaagag
gagagccagcagtttgcagagaccagaaagagtcttaagaagagtgtagcggaacttcgg
gacacaatccagactatgatgcaggagaatgagaagctgccagaaatggagaagctggag
cagctggagtttaacctggacatggaggagcagcagagactgcaagccgagggagagcag
gaggtcactaaggtgagaaaggagattgagcttgagaacctggcaaaatgttatctgcac
gacattttcaagaagaagtactgggactccatgaacgtgaaagggaaggccattaagggc
ttccactcagggtatgaagtgaataactttcccatgaaggaacgcacagcaaaggaacta
gaagagctttacagggtagaggccatccgaaaaatcgaacaggctgacactagtttgcag
caagacattttggagaacaacaaggcaccattagagagggatgaagacgaggaggataaa
gggcatgaggtggagagcttagctttaacaggtagtctgagtgctcaatatggaggttca
aaccctcacttatacagccagttcagtctgcgtacaagagaccaaaagctcaaccagatc
atcctgttacaggatgttatttacaaagtgaaaacagcttttaacacagagtttgaagct
gtgtacaagcagaaggagcaagagattagtcgcataagagataagaacaagcgcattaca
gagattatgaataagctggagctgcaggagacgctgtgggagcccacactgaccgacaac
gagagaccagagagagctctcgctgtcagtgactctgagatcaaggttgagaaatacctg
acacctgcacagaggcagagagaggaggagcagagaaaggaagaggagcagaggcggctt
gcagacaagggggacaacatcaaagagcgagctttggatgatatgatgagtggagtcctt
gaggtcaaaaaagaggacatcctgagattggaagtgccaccaccggagtttatagttaag
cctgagcttcagtggacagaagaggaacgaagaagctacaaagagcatgagagaaaagta
aaggagctcagtgaagaacaggagaaatatagaaagaccttggaggcagagatgaagaaa
ctgcaggcatccattaaagatgccacacaggcctttgatgaaacactgagcaagctattt
gaaaggaaagtgaaatcagaaatggttttataccaggaagagctaaagatcgccaatcta
ttccattccttactaattgaggaagagatgatgaacagagaggaagagcttatctacaga
ctggagaaggcacaaattgttaagaatcaaattgggaaaactttgaataatcacagagag
gaagtagaggcctttcgggagacgtatgataatacagtagcggaagataaactccttgac
attggatttcgcaaagagctttttgatgtccctggacacattgttgaccagctgtacaaa
ctttacaaacgcagacccaggatccagattatgaggacacagacagacacagacagcttg
cttaaggaatctcctatgttgagtcgagcagcagcagaaggactctcacagatgatgaag
gccatggaggagttagacgctccacagaacatgccagagggtctggacccaatcgtgtgg
gagagattctgtctggtcaggaggaccaaaatggagagtgagcagaaggtaaaaatgaag
gcattgaccttggcggagatgcagacatttctgcagaagagaacagaggaggaggagaat
gcacaaatggaaataaagaacctttttgatcatcttaattgcctgcgagaagagaggtcg
aggttctgccttgacgttatggtacagatcctgttaaaacagggccaggttgaggtggat
actggagactttaatgcagactattcagactctttgttgctccaacgctatgttgtggag
gacctgaacaacaccatcagggctttaggtgagcagaagatcgccagtatggtggagtgc
aaaaactttcataaaggaattattcagcaggaatgggagcataagaggatgagtatgcag
attgaagatctcaaaaacaaagccagagatattcagatgctgcatgtgtctcaggaactc
caagagtacctgacagagacagaccatgacaacagaatgtccaagaaggtgtctactctg
gagaagacagtaacattacaagagaagacttatacaaagaatgtagagagctgtaagaag
cagataaaggagctgaacagacaaattaagatgaagaaagagaataatgaagctttagat
gtgcagttaaccaacatgcaagtgactgttgcagaaagaagaaacatttatgagacctca
gcaatggaggaaatccaagagcgtgaagctaagcaacgttatcaaaacatcctgcagagg
aagaaccttgtggacttggccaaagcacaggatatggacatagccatactgagtgctgag
ttggaatgcatgagaaggaagacatttcctgctctttctcaatag
DBGET
integrated database retrieval system
