Ictalurus punctatus (channel catfish): 108262789
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Entry
108262789 CDS
T04658
Symbol
stx3a
Name
(RefSeq) syntaxin-3 isoform X2
KO
K08486
syntaxin 1B/2/3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108262789 (stx3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108262789 (stx3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108262789 (stx3a)
Membrane trafficking [BR:
ipu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108262789 (stx3a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108262789 (stx3a)
Exosomal proteins of other body fluids (saliva and urine)
108262789 (stx3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
HMMR_N
Baculo_F
YtxH
Baculo_PEP_C
FlaC_arch
AAA_13
PI_PP_C
WXG100
DUF2746
SYN8_N
Spectrin_Anc-1
DUF6827
DUF8045
Occludin_ELL
DUF8567
FUSC
Motif
Other DBs
NCBI-GeneID:
108262789
NCBI-ProteinID:
XP_017318610
Ensembl:
ENSIPUG00000013882
UniProt:
A0A2D0QMC5
LinkDB
All DBs
Position
3:28114318..28120592
Genome browser
AA seq
285 aa
AA seq
DB search
MKDRLAQLKEKTDQTPEDVDIQVENKEFMDEFFVQIEEIRTSIDKIDENVTEIKRLYSVI
LSAPTSDQKTQDDLEAITNEIKKLANNVRNKLKSIEQSLESNAEERVSADTRIKKSQHAV
LARKFVEVMTKYNEAQVEFREKSKGRIQRQLEITGKTTTDEELEEMLDGGNAAVFTAGLM
DSAISKQALSEIEARHKDIMRLESSIKELHDMFVDIAMLVENQGSIIDRIESNMDQSVGF
VERAVADTKKAAKFQQEARRKQMMITLCCIILAVIIGSLVYSWLK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgactggcacagctgaaggagaaaacagatcaaacacctgaagatgttgac
atccaggtggaaaataaagaatttatggatgagttctttgttcagattgaggagatccgt
accagtattgataagattgatgagaacgtgactgagataaagcgcctgtattctgtcatc
ctctctgcacctacctcggaccaaaagacacaagatgacctggaagccatcaccaatgaa
atcaagaaattagccaacaatgttcgcaataaactcaaaagcatcgagcagagtttggag
tcaaatgcagaagagagagtctcagccgatacacggataaagaaatctcagcatgctgtc
ctagcaagaaaatttgtggaggtaatgaccaagtacaatgaagcacaagtagagttcaga
gagaagagcaaagggaggatccagagacagctagagatcacgggtaaaaccactactgat
gaggagctggaagagatgctggatggtggcaatgctgccgtcttcacagcagggctcatg
gactcagccatctccaagcaggccttgagtgaaattgaagcgaggcacaaagacatcatg
cgactggagagcagcattaaggagctgcatgacatgtttgttgacattgccatgctagtg
gagaatcagggaagcataatagacaggattgaaagcaacatggaccagtctgtgggcttc
gtggaacgagcagtggctgacaccaaaaaagcagccaagttccagcaggaagcccggagg
aaacagatgatgatcacattgtgttgcatcattcttgcggtcatcattggctccctcgta
tacagctggttgaagtaa
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