Ictalurus punctatus (channel catfish): 108262825
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Entry
108262825 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108262825
04082 Neuroactive ligand signaling
108262825
04519 Cadherin signaling
108262825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108262825
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108262825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BBL5
Motif
Other DBs
NCBI-GeneID:
108262825
NCBI-ProteinID:
XP_017318662
Ensembl:
ENSIPUG00000018998
UniProt:
A0A2D0QK10
LinkDB
All DBs
Position
3:24498923..24559922
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AA seq
456 aa
AA seq
DB search
MRPSCFILFAFILFSSILEEPLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDDGPVTVG
MSLDIASIDKISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFIVD
SKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWGYN
VNDVMFYWVRGNDSVSGLDTLRLAQYTVEDHYTSASEAVYETGNYPKLIFHFELKRSILY
FILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIK
AIDVYLGICFSFIFGALIEYAVAHFCTLQHPEYNSAFTHMQDCEEEINGIVTTIASDSSR
AKRRKDTPTPAPTSTPSGEPDLMAQTPSHLEPMTPEALEDPLNRCIRILSLIRQMLRSVN
CCHVENPHYIDNYSRVTFPLSFVVVNLLYWTYYLYF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaggccttcctgtttcattctgtttgccttcatcctcttcagcagcatcctggaggag
ccactgctgagtgctgaggtgaaggagggagaaattctgcctcccaccattcagaagctg
atgaaaggatacaacaagtacctaaggcctttctttgatgatggccctgtcactgtgggg
atgagtttggacattgctagcattgacaagatatcagagatcaacatggactacactgcc
accatcttcctgcggcagcgctggacagatgagaggctggtgtttgaaggtaataagagc
ttgagtctggatgggcgtctggtagagctactctgggttcctgataccttcattgtggat
tccaagaagtccttcctgcatgatatcacagtggagaaccgtctgatccgaatctttccc
aatggaacggtgctttacgctctccggatcaccaccactgtggcctgcaacatggacctg
actaaataccccatggataaacagacatgcaccctacaactggaaagctggggttataat
gtcaacgatgtgatgttttactgggtgagaggcaacgactcagtcagtgggttggatact
ctgcgtctggcacagtacacagtagaggatcattacacttctgcctctgaggctgtgtat
gagacaggtaattatcctaaactcatattccattttgagctgaagcgaagcattctgtac
ttcatcctggaaacctacgtgccctccagtctgctagtcgtgctctcctgggtgtccttc
tggatcagccagtcatccgtgcctgctcgcatatgtataggagtaacgacagtgttaacg
atgaccactctgatgatgggtgcgaggacatctctacccaacgctaactgcttcatcaag
gcaatagacgtgtatttgggaatttgtttcagtttcatctttggagcactgatagagtat
gctgttgctcacttctgcacactccagcacccagagtacaacagtgcgtttacgcacatg
caggactgtgaagaagagatcaatggcattgtcacaaccattgccagtgattccagccga
gcaaagcgacgtaaagacactccaacccctgctccaacatcgactcctagcggagagcct
gatctcatggcccaaaccccttctcacctagagcctatgaccccggaggccctggaggat
cctcttaaccgctgcatcagaatcctgtcactcataagacagatgcttcgctctgtgaac
tgctgtcatgtggagaatccacattacatagacaactactcccgtgtaacatttcccctc
tcgtttgtcgtagttaatctgctctactggacttactatctgtacttttag
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