Ictalurus punctatus (channel catfish): 108262828
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Entry
108262828 CDS
T04658
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108262828
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
108262828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_22
AAA
Fer4
AAA_15
RsgA_GTPase
AAA_29
Fer4_6
AAA_14
AAA_16
NACHT
SRP54
nSTAND3
Fer4_10
Fer4_21
AAA_23
TsaE
Fer4_2
AAA_5
Fer4_4
AAA_7
AAA_19
Fer4_9
Fer4_16
NPHP3_N
Fer4_7
Motif
Other DBs
NCBI-GeneID:
108262828
NCBI-ProteinID:
XP_017318664
Ensembl:
ENSIPUG00000004734
UniProt:
W6A365
LinkDB
All DBs
Position
3:31721730..31733133
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AA seq
599 aa
AA seq
DB search
MSEKPIRIAIVNHDKCKPKKCKQECKKSCPVVRMGKLCIEVTAQSKIVWIAESLCIGCAI
CIKKCPFGALAIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDTPPDWQEILAYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPNTV
TGNVGSILSRKDDCKTAAVVCEQLDLTHLRDRKVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLITPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETAAEEDVKKMCRYQYPNMKKTMGDF
ELRIIEGEFTDSEIMVMLGENGTGKTTFIRLLAGRLKPDNEEQVPILNVSYKPQKISPKF
KGSVRAMLHEKIRDAYTHPQFVTDVMKPMQIDSIIDQDVQNLSGGELQRVALTLCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPS
QRTTANTPQMLLAGMNKFLSLLEITFRRDPNNFRPRINKLNSIKDVEQKRSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaccaatccgaattgccatcgtgaaccacgataaatgcaagccaaagaaa
tgcaagcaggagtgcaaaaagagctgcccggtggtccgaatgggcaaactgtgtatagag
gtcaccgctcaaagcaaaatcgtatggatagctgaatcactctgtataggatgcgctatc
tgcattaagaagtgtccatttggtgctctggctatcgtcaacctgccgagcaacctggag
aaagagaccacgcaccgatactgtgccaactctttcaaactacaccggttaccaatcccc
agacctggagaggttttagggctggtcggtactaacggcattggaaaatcaacagcactt
aagatcctcgctggaaaacagaagcccaatctggggaaatatgatactcctcctgactgg
caggaaatcctggcttactttcgaggatctgaactgcagaactatttcacaaagatcctg
gaagatgatctgaaagctatagtgaagcctcagtacgtcgaccagatccccaacactgtc
acgggaaacgtaggctctattctgagcaggaaggatgactgtaagacagcggctgtagtc
tgtgagcaactcgatctgactcatctcagggacaggaaggttgaggatctgtcaggagga
gagctacagcgtttcgcctgtgcagtggtgtgcatccagagagcagacattttcatgttt
gatgagccctccagttacctggacgtgaagcagcgtttgaaagccgccatcaccattcgc
tctcttatcacaccagacagatacataattgttgtggagcatgatctgagtgttctggac
tacctgtctgacttcatctgctgtctgtatggcgtgcccagcgcttacggcgtcgttacc
atgcccttcagtgttcgagaaggcatcaacattttcctggacggatacgtgccgaccgag
aacctccgtttccgtgacgcttcactggttttcaaagtagctgagacagccgccgaagag
gatgtgaagaagatgtgtcgctaccagtaccccaatatgaagaagaccatgggtgacttc
gagctgcggatcatcgagggcgagttcaccgactctgagatcatggtcatgcttggagaa
aacggaactggcaaaactacattcatcaggctgctcgctggtcgattaaaaccagataat
gaagagcaggtcccgatcctcaacgtcagctacaaacctcaaaagatcagccccaaattc
aagggtagcgtgcgtgccatgctgcacgagaagatcagggatgcgtacacacaccctcag
ttcgtcaccgacgtcatgaaacctatgcagattgacagcatcatcgatcaggatgttcag
aatttgtctggaggagagctgcagagagtagcgctcactctgtgtctgggtaaacctgca
gacgtctacctgatagatgagccctcggcatacctggactcagaacagaggctgatggct
gccagagttatcaaacgattcatcctccatgcaaagaagacagcttttgtagtcgagcat
gacttcatcatggccacctacctggctgatcgcgttattgtgttcgacggagttccgtca
cagaggacgaccgccaacacgccacagatgctgcttgctggcatgaacaagttcctttca
ctgctggagattacgttcagaagagaccccaacaacttcaggccaagaatcaacaagctc
aattccattaaggatgtcgaacagaagagaagtggcaattatttcttcctcgacgattag
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