Ictalurus punctatus (channel catfish): 108262858
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Entry
108262858 CDS
T04658
Symbol
gabra2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108262858 (gabra2a)
04082 Neuroactive ligand signaling
108262858 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108262858 (gabra2a)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108262858 (gabra2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108262858
NCBI-ProteinID:
XP_017318704
Ensembl:
ENSIPUG00000007939
UniProt:
A0A2D0QKE6
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All DBs
Position
3:14335367..14355998
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AA seq
451 aa
AA seq
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MYGRYIRSYGFLIYLMLNGVWQTRSKSDVSGSEAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTEVKTDIYVTSFGPVSDADMEYTVDVFFRQRWTDERLKFHGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLYTMRLTVQAECPMHLEDFPMDSHSC
PLKFGSYAYTLTEVTYVWTRNATLSVEVAPDGSRLNQYDLRGQTVGKETIKSSTGEYTVM
TVHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSILNDKKKEGSVM
KKNNAYAVAVANYAPHIGKDSTLPTVSKSAPAEPTKAQPVAKESKKTFNSVSKIDRMSRI
IFPVLFGSFNLVYWATYLNREPVIKNMVPSH
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtatggccgatatattcgttcctatggattcttgatctacttgatgttaaatggagtc
tggcagacaaggtcaaaatcagatgtgtctgggtcagaggcttttaaaaacaacatcaca
ctttttacaaggatcctggaccgactgctggatggctatgataacaggctgagaccgggt
cttggagatcgagtgacagaggtaaagactgatatatacgtgaccagttttgggccagta
tcggatgcagacatggagtacacagtggacgtgttcttccgccagcgctggacagatgag
cgcctgaagttccacgggccaatgaacatcctacggctcaataatctgatggccagtaag
atctggacccctgacactttcttccacaatggcaagaagtctgtggctcataacatgact
atgccaaacaaattactgcggatcatggaaaatgggacactactttacaccatgaggctg
actgtgcaggcagaatgtccaatgcatttggaggacttccccatggactctcattcatgt
ccactgaagtttggcagctatgcatatactctgacagaggtgacctatgtttggacacga
aatgccacgctttcagtagaggtggctccagacggatcaaggttgaaccagtatgacttg
aggggccaaactgttggcaaagaaacgattaaatccagtactggggaatatacagtgatg
acagttcatttccatctgaagaggaagattgggtactttgttatccaaacttacttgccc
tgcatcatgactgtcattttgtcccaggtctccttctggcttaaccgtgaatcagtacct
gctcgaacagtttttggtgtgactacagtgctcacaatgaccactctgagtatcagtgct
cgtaactcattgcctaaagtagcctatgccactgcgatggactggttcattgctgtgtgc
tatgcctttgtcttctctgccctcattgagtttgcaacagtcaactatttcaccaaacgc
ggctgggcctgggatggcaagagcattcttaatgacaagaaaaaagagggctctgttatg
aagaagaacaatgcttatgcagtcgctgtggcaaactatgctccccacatcggtaaggat
tcaactttgcccaccgtttccaagagtgctccagcagagcccactaaagctcagcccgtg
gctaaagagagcaagaagaccttcaacagcgtaagcaagatcgaccgcatgtcccgcatc
atcttccctgtgctttttggcagcttcaacctcgtctactgggctacatatctcaacaga
gaacctgtcattaagaacatggttccctctcactga
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