Ictalurus punctatus (channel catfish): 108262866
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Entry
108262866 CDS
T04658
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108262866 (lingo2b)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108262866 (lingo2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
Ig_2
V-set
LRR_RPS2
LRR_9
LRRNT
Ig_6
LRR_NXF1-5
LRR_Zer-1
C2-set_2
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
108262866
NCBI-ProteinID:
XP_017318711
Ensembl:
ENSIPUG00000007386
LinkDB
All DBs
Position
3:14553639..14575101
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AA seq
607 aa
AA seq
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MLLSLFSCAVGFSLLLLLLFPYPAQACPARCECSVPTRSVSCHRKRLAQVPEGIPIETRA
LDLSKNRLRIITPQNFSGLLLLEELDLSTNLLSSVEPGSFRAQPRLRTLRLRNNQLTLLP
RGALAGLGELTLLDISQNRLVILLDYGFEDQRRLRVLELADNELVFVAPRAFSGLPALRS
LTLQRCNLSAVPSHALAHLHGLTSLRLRQLDIAELLPHTFKGLGRLRHLEVDHWPALEAV
SSLALQGLNLSTLFITHTNLSVVPVLSHLSYLTHLNLSYSSVRMLPAGWLRGLDRLEVLH
VRKAQLVRVEAQAFQGALSLRLLDLSYNRLTTLERVTLPASMALQNLLINQNPLVCDCRL
RWLLQRTLPLQFGEVQPQCTTPAALAGKPFSDIVEPLLSRYVICTKPRVTAMSTQPAQAE
EGQKAWLYCTADGAPPPSVSWLTPHRRHITTKSTGRMVVHGNGSLEFRVVEPQDSGIYVC
VASNPAGNSTLSITLAVKSLGLRDGALYGNRSFIFDPDYNSSLINGTEHYTIRMVLDFTT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGASSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttgttctcctgtgctgtgggcttctccctcttactgctcctcctgttc
ccgtaccctgcccaggcttgccctgcccgttgtgagtgttctgtgcccacacgttcagtc
tcgtgccaccgcaagcggctggcgcaagtgcccgagggcatccccatcgagactcgagca
ctggatctcagcaaaaaccgtctgcgcattatcacaccacagaatttctctggccttctg
ttgctagaggagcttgacttgagcaccaacctgttgtcttctgtggagcctggaagtttt
cgtgcccagccgcgcttacgaacactgcgtctgcgcaacaatcagcttaccttgctgcca
cgtggtgcgcttgctggcctgggtgagctcactctgctggacatcagccaaaaccgtctg
gttattctgcttgattatggctttgaggaccagcggcgtctgcgtgtgcttgagcttgct
gacaatgagctagtttttgttgcaccccgtgccttcagtggcttgcctgcattgcgttcg
ctgacactgcagcgctgtaacctgagtgctgtgcccagccacgcactggcgcacctgcac
ggcctaaccagtcttcgccttagacagctggacattgcagaactgctaccacacaccttc
aagggcctgggccgtctgcgtcatcttgaggtggatcattggccagcactggaagctgtg
tcctctcttgccctgcagggtctgaatcttagcacgctcttcatcacccataccaacctt
tcagtggtaccagtgctgagccacctgtcctatttgacccatctgaacctgtcatacagc
agcgtgaggatgttgccagctggctggctgcgtggtctggatcggctggaagtgctgcat
gtacgcaaggctcagttggtgcgtgtggaggcccaagccttccaaggggcactgtcactt
cgtctgcttgacctctcctacaatcgcctgactacactggaaagagtcacactgccagca
tctatggccttgcagaacctcctgattaaccaaaacccattagtgtgtgactgccgtttg
cgctggctacttcaaaggacactgccgctacaatttggagaagtgcaacctcagtgcaca
acccctgccgctctggctgggaaacctttcagtgatatagtagagccactgctttcccgc
tacgtcatatgcaccaaacccagggtcactgccatgtcgacacaaccagcccaagcagaa
gagggacaaaaggcatggttgtactgcacagcagatggtgctccacccccctctgtctcc
tggctgacaccacacaggaggcacatcaccaccaagagcacaggccgcatggttgtccat
ggcaacggttccctggagttccgggtagtggagcctcaggacagtggtatttatgtgtgc
gtggcatccaatcctgcaggcaattccaccctgtccataacactagctgttaaaagcctg
ggccttagggatggggctctctatggcaaccgcagcttcatcttcgatcctgattacaat
agctccttgatcaatggcacagagcattacacaatcaggatggtgttggacttcactacc
attcttgtgtctacggccatgggctgcctcagcttcctgggtgtggtccttttctgtttc
ttgctactgttcgcttggagtcgaggcaaaggcaagcacagaggaagtgtggacatccag
tatgttccccgcaaaaggaaaggagccagcagtgagcttactgagaccagtggccccaga
cgtgtcaacatgaagatgatatga
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