Ictalurus punctatus (channel catfish): 108262877
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Entry
108262877 CDS
T04658
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108262877
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108262877
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_9
SH3_1
BAR
Motif
Other DBs
NCBI-GeneID:
108262877
NCBI-ProteinID:
XP_053535919
Ensembl:
ENSIPUG00000001917
UniProt:
A0A9F7TG22
LinkDB
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Position
3:complement(36497451..36518437)
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AA seq
753 aa
AA seq
DB search
MDPKECEGNDRENEKEEKKEKDRKIKRRPFLRYLERRRTDTIVDDDSGKADVSINTLVRR
SQSDKTEYSAKLKGKLAPHELPPPLLEPEEIRHRKMVKRSKVIEELVRTEEDYLRGLDLC
IREVLTPLRNTQVVDVERLFTNMESVSAVSAELLLRLQEITAEPDPETQLIGEVFIQAKG
ALEDVYKIYCYHHDEASALLKSYDTQEEAQQHFRTCISALKQIYDQEGKSNLLDMGSLLI
KPVQRVMKYPLLLAELQQATPIDHPDNQPLQEALTTAKIINANINEFKRRKDIVMKYKRS
DDEGTLKGKLNKINIHSIRKKSDRITGYFKILTGVEPQVRDEAFDREEKLFRNLEKAVRQ
LIKNLNVYLLHAQDMIAVAVQDVEDLEAIMKDPDKIDTNGFQHRRNGHDPYKRLVERLEW
SVLSPLSSLQTMFSSPQKLIQKRYDKLLDSCSSGSEEQLQAQRDYQALNAQLTVELQRFN
HAAQTILTNCLLTVIKLLRELTEGARPSVYQLPAPLSNISEVQNSIMEEISNLMFFRENA
QKLMERKVSFEKREKKNMAVECVQPQAECVRSMLISQYPSDRLYELKRKCNATQDQDVTL
LQGELVALLEDHDPFGSVTRWLVDTGSTQGYVYSTFLKPYNPQRDVHSESTDDFDNLSLF
VSGSRRGSHSSYSPSTPSSQQEETPSTDDEEQHFYAVYAFVARCEQELSLQEYQHVRILQ
FSDQGGNKDWWLAESKGQKGYVPANYLGKMSYA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaggaatgtgaaggaaatgacagagagaatgaaaaagaggagaagaaagag
aaggacaggaagattaagagaaggccctttctcaggtacctggagaggaggaggacagac
accatcgtggacgatgactcgggtaaagcagacgtcagcatcaacacgctggtgcgccgg
agtcagtccgataagaccgaatacagcgccaaactcaaaggaaaactggcaccccatgaa
ctcccgccccccttactggaacctgaggagatccgtcacaggaagatggtgaaaaggtca
aaggtcatcgaggagctggtgaggacagaggaggattacctgagaggcctggacctgtgc
attagggaagtgctgacacctctacgcaacacacaggtggtggatgtggagcgtctcttc
actaacatggagtctgtgagtgctgtatcagccgagctgctgctcagactgcaggaaatc
acagcagaacctgatccagaaacacagctcataggggaggtgtttatccaggcgaagggt
gcgttggaggatgtgtataagatttactgttaccaccacgacgaggccagtgctctgtta
aagagctatgacacgcaggaggaggcgcagcagcacttcaggacctgtatatctgcactc
aagcagatttatgaccaagaagggaaatccaacctcctggacatggggtctttactcatt
aaacctgtgcagcgtgtgatgaaataccccctcctattggctgagctgcagcaggccaca
cccattgatcatcctgacaaccagccattgcaggaagcgctaacgacagcgaagatcatc
aacgccaacatcaacgagttcaagaggaggaaggacatcgtgatgaagtataagaggagt
gatgatgaaggaacactgaagggaaaactgaacaaaataaacatccactccatcaggaag
aaatccgaccgaatcactggatacttcaagatcctcaccggagtggaaccacaggtgcgt
gacgaagcctttgatagagaggagaaactcttccgtaatctggagaaagccgtcagacag
ctgatcaaaaacctcaatgtctatctgctccatgcacaggacatgatcgcggtggcggtt
caggatgtggaggacttagaggccatcatgaaggatcctgataaaatcgacaccaatgga
tttcagcacaggaggaatggtcatgatccctataaacgccttgtagagcggttggagtgg
tcggtgctgtcccccctgtcttctctacagaccatgttctcatcccctcagaagctgatc
cagaaacgttacgataagctgctggactcgtgttcctcaggcagtgaggagcagcttcag
gctcagcgtgactaccaggcgctaaacgctcagctcaccgtcgagcttcagcgcttcaac
cacgccgcccagaccatcctcaccaactgcctgctcacggtcatcaagctgctcagggaa
ctgaccgagggggccagaccatccgtataccaacttcctgctcctctgtcgaacatcagc
gaggtacagaacagcatcatggaggagatcagcaacctgatgttcttcagagaaaacgca
cagaagctgatggagagaaaagtcagctttgagaaacgagagaagaagaacatggcggta
gagtgtgtgcagccccaggcagagtgtgtaaggtccatgctgatctctcagtatccttct
gatcgtctgtatgagctgaagaggaagtgtaacgccactcaggatcaggacgtcacactc
ctgcagggggaactggtggccttactggaagatcatgacccattcggcagcgtcacccgc
tggctcgtcgacaccgggagcacgcaaggctacgtgtactcgaccttcctgaagccgtat
aaccctcagcgagacgttcacagcgaaagcactgatgattttgacaatctcagtctgttc
gtgtcaggcagcaggaggggcagtcactccagctacagtccgtccactccgtccagccag
caggaggagacaccgagcacagacgatgaggagcagcatttctacgcagtgtatgcattc
gtggcacgctgtgagcaggagctcagtctgcaggagtaccagcacgtccgcatcctacag
ttctccgaccaggggggaaacaaagactggtggctcgctgagtccaagggccagaagggc
tacgtccccgctaactacctcggcaagatgtcctacgcctga
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