Ictalurus punctatus (channel catfish): 108262901
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Entry
108262901 CDS
T04658
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108262901
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108262901
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
ig
Ig_2
Ig_VEGFR-1-like_5th
fn3
C2-set_3
TP_0123_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
108262901
NCBI-ProteinID:
XP_017318741
Ensembl:
ENSIPUG00000024605
LinkDB
All DBs
Position
3:complement(20159886..20163085)
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AA seq
638 aa
AA seq
DB search
MMVIVFFALLLASGGFPPAHTSCPFRCSCLYHNLSDGSKARSVICNNPEISLVPANFPSD
TSKLRIEKTAIKRIPSEAFKYLPNLEFLWMSFNALSSVNVDSFRGLNSLEELRLDGNFLT
AFPWESLKYTPNIKLLDLHNNKLSSVPTEAAKYIRPLTYLDLSSNNLLTMPSEVLTTWMA
VKPIQGAESSKIILGLHDNPWLCDCRLYDLAQFQKTPSLSVAFIDTSLRCAAPESLSGVL
FSNADLRRCQEPKVHSAVSRIRSTAGNNVLLRCGAVGVPMPNLTWRRADGKTLNGTVKQE
NSKDGIVWSILNVPAVSFHDSGKYICKASNYAGSAEALIVLIISKSPKLDSAAGTEKKMK
EDIQNPVEKDKIIIKYISPSPSSVPVTTRPRGYTGPYPGMQSDSAPEIGTNAQPTSPDRL
LETNLSNLAANASSLQQDFDRIVRSVKVIGDTDYTVCLMWRAPKANNTTAFSVLYAVFGE
RDMRRINVSPGNNRIIIEGLVPKTKYIACVCVKGLIPKKEQCVIFSTDAAASANGTQKLI
NVVVISVACVIAVPLTVVVCCGALKRKIQKLLSKKSKDIQDSYVTFESLSPSTKAKGLEG
DYLSKLNPEESNRLISARSSLDSESITKTEEQPNDYLC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatggttattgtcttctttgctctgttgcttgcatcaggtggatttccgcctgcacat
acctcatgtccttttcggtgcagctgcctctatcacaacctgagtgatggatccaaggcc
aggagtgtgatttgtaacaatcctgagatatccctagttcctgccaacttccccagtgac
acatccaaactcagaatagaaaaaacagctataaagaggatccccagtgaagcatttaaa
tacctccccaatctggagtttttgtggatgtccttcaatgcattgtcatcagtgaacgtg
gacagcttccgtggactgaacagtctggaagagctcaggcttgatggaaatttccttact
gcttttccttgggagtccttaaagtatacgcctaacataaagctccttgacctgcacaat
aacaaactctcttcagtccctacagaggcagcaaagtacataagacctttaacatacctg
gatctctccagcaataacctgctgacgatgccgtctgaagtccttactacttggatggca
gttaaacccatccaaggagcagagagttcaaaaattattcttggactccatgacaatcct
tggctttgtgactgtcggttgtatgaccttgcccagttccaaaagactccatcactgtct
gtggccttcattgacactagcctgaggtgtgctgctcctgagagtctctcaggagttctg
ttcagtaatgctgacctgagacgatgccaggagcccaaggttcattcagctgtatcccgc
atcaggagcacagcaggcaacaatgtgttactgcgatgtggtgctgttggtgtccccatg
cccaatctgacatggagaagggcagatgggaaaacattgaatggtacagttaaacaagag
aactctaaggatggaattgtttggtctattctaaatgtgcctgcggtctccttccatgac
tctgggaaatacatttgcaaagcaagcaactatgctgggagtgcagaggctttgattgtt
ttaatcataagcaagtctccaaagttagacagtgcagctggaactgaaaagaaaatgaaa
gaagacatacaaaaccctgttgaaaaagataaaattattatcaaatatatttccccaagt
ccatcctctgttcctgtaactacaagacctaggggttacactggtccctatcctggcatg
cagagtgacagtgctccagagattgggacaaatgcacaaccaactagtcctgatcgactg
ttagagaccaatctgagcaacctcgcagctaatgcatcctctctgcagcaagactttgac
aggattgttcgctctgtcaaagtgattggtgatacagactataccgtgtgcctaatgtgg
agagctccaaaagccaataacacgactgcctttagtgtgctgtatgcagtatttggagag
agggacatgcgcagaatcaatgtcagtcctgggaacaatcgaatcatcattgagggcttg
gttccaaaaaccaaatacattgcctgtgtgtgtgtaaagggtttgatccctaaaaaagag
cagtgtgtaatcttctccacagatgcagcagcaagtgctaatgggacccaaaagcttatt
aatgtagttgtaatatctgttgcctgtgtgatagctgtgcctcttactgtggttgtctgt
tgtggagcacttaagaggaaaatccaaaaacttctgagcaaaaagtccaaagacattcag
gattcatatgtaacatttgagagtctctcccccagcacaaaggccaaaggcctggagggg
gactatctgtccaaactcaacccagaggagtccaatagattgatatcagctaggtctagc
ctggactctgagtcaattactaagactgaagaacagccaaatgattacttgtgctga
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