KEGG   Ictalurus punctatus (channel catfish): 108262902
Entry
108262902         CDS       T04658                                 
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1
  KO
K16501  cadherin-related family member 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ipu04515]
    108262902 (cdhr1a)
Cell adhesion molecules [BR:ipu04515]
 Cadherins
  Cadherin related
   108262902 (cdhr1a)
SSDB
Motif
Pfam: Cadherin
Other DBs
NCBI-GeneID: 108262902
NCBI-ProteinID: XP_053535018
Ensembl: ENSIPUG00000024607
UniProt: A0A9F7REI3
LinkDB
Position
3:20134778..20151759
AA seq 862 aa
MADSRMKSKANGLISKTGSFFSRFFIAHFCFISLSDYAPYFYDNGPHSNGNLAFFSLSED
TPKGTHIYVLNGTDPEGQPVRYGLAFDPGSKEYFSVDPISGIVTLKEELDREIQDEIEVL
VSISDEFNNVVEKVRVFVMDANDEEPRFQNLPSTVDVPESTPSGSSIYKVQALDRDTGSG
GSVTYFLQSTGPNTKFAIDHYSGVLRIKEGEALDYESVRTHFVTVVAKDGGGSYNGREQV
MSSSATLTINVIDSQDTPPSFVGTPYFGYVYEVSSPGSEIFTVFAKDGDVETPNPIVYSI
QSGADGVFGINKTSGCITLLAYPDHLRKEMFNIQVKASEVNSQGSVMDFAITTVTIRVVD
LNNHPPTFYGENGPQDTFELTMYEHPPEGEILRGLRITVNDSDQGANAKFNLRLVGPGHM
LQMVPRTVLNEAQVTLLVEDSTAIDYEKFHFLTFKILAVEIDTTERFSATADIVIHLLDT
NDNVPSFSSDFYIARVPENSPGGSNVVSVTAKDPDSGLWGVVKYSIHGPGSDLFFIQSDS
GIIYTQPWASLDAEVKSKYNFFVKAEDTEGKYSLAEVFVTVLDLNDHPPEFNENILEKTM
IIGAPVKIEAIDDDAEEPNNVIEYSIMKAEPDNIFDINADTGEIKLKPYIKSMDIVQNIT
NQKDCTWSVVVQARDRGSPSFSTTTLVKIDITEATQLNGPLASFLMKSRENPMQILGMIA
AVIIALVFVTVLISTATFMRNKKSNKILPSRRIIRKKPRQRKQWNFHNPFKQQNNSERFM
KESEVAENVNCNNNSVGVQQSLPLPPPLPGYSRLGERRWVVPSIPETVAKRKCFRNNQSH
INTALVSELKLRLEQKKWMNQC
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggctgactcaaggatgaaaagcaaagcaaatggtctgatttcaaagactgggagcttc
ttctccaggttttttattgcgcatttttgttttatttcactgagtgattacgcaccatac
ttctatgacaatgggccacatagtaatggtaatctggcatttttcagtctttcagaggac
acaccaaagggaacgcatatatatgttctgaatggaactgatccagagggacagcctgta
agatatggcctggcctttgatccaggatctaaagaatattttagtgttgatcccatatct
ggaatagttactctgaaagaggaacttgacagagagatacaggatgagattgaggtcctt
gtcagtatttccgatgagtttaataacgtagtagaaaaagtgagggtgtttgtgatggac
gccaatgatgaggagccacggtttcagaacctgccctccactgtggatgtgccagagagc
acaccctctgggagcagtatatataaagtgcaggctttggacagagatacaggctcaggt
ggatctgtcacctactttcttcaaagcactggcccaaacactaagtttgctattgaccac
tacagtggggtgttaaggataaaagagggtgaggctctcgattatgagagcgtgaggaca
cattttgttactgtggtggcaaaggatggaggtggaagttataatggaagggaacaggtg
atgtcatcgtccgctaccctgacaataaatgtgattgacagtcaggacacgcctcccagt
tttgtcggtacaccatactttggctatgtttatgaagtctcttcacctggatctgaaata
ttcactgtttttgccaaagatggagatgtagaaactcctaatccaattgtttattctatt
cagagtggagctgatggtgtatttggcatcaacaaaacaagtggctgcatcactctccta
gcctatcctgatcatttaagaaaggaaatgtttaatatccaggtcaaggcttcagaggtg
aattcacagggaagtgtcatggactttgctatcaccactgtaactattcgagtagtggat
ctgaacaaccacccccctacattttacggtgagaatggcccacaggacacctttgagttg
accatgtatgaacatcctccagagggagagatactgaggggcttaaggattacagtcaat
gactcagaccagggtgcaaatgcaaagttcaacctaaggctggtggggccaggtcatatg
ctgcaaatggtcccaaggactgtccttaatgaagctcaagtcactttattagtagaagat
tccactgcaatagactatgagaaattccactttctgacattcaagattcttgcagtggaa
attgacaccacggagagattcagcgccactgcagatatagtcatacatttgcttgacact
aacgataacgttccaagtttctcctctgatttctatattgcacgagtcccagagaactca
ccaggtggctccaatgttgtgtctgtgacagctaaggatccagattctggtttgtggggt
gttgtcaaatactccatccacggcccaggatcagatcttttcttcatccagtcagattca
gggatcatctacactcagccctgggccagtctggacgctgaggtgaaatccaagtacaat
ttctttgttaaggcagaggacacagagggaaaatacagccttgctgaagtttttgtcaca
gttctggatctcaatgatcatccaccggagttcaatgagaatattttagagaaaacaatg
attattggtgcacctgtgaaaatagaggcaatagacgatgatgcagaggagccaaacaat
gttattgagtattccatcatgaaagcagaaccggacaatatctttgacatcaatgcagat
acaggagaaatcaaattgaagccctacatcaagtcaatggacatagttcaaaacatcaca
aatcagaaagactgcacctggtctgtggtggtccaggccagagacagaggctctccgtct
ttcagtacaaccacacttgtgaaaattgatatcacagaagcaacacaactcaatggccca
ttggcatccttcttaatgaaaagtagagaaaatcccatgcaaatccttggcatgattgca
gctgtcattatagctttggtttttgtgacagtcttgatctctacagctactttcatgcgt
aataaaaagtctaacaagatcttgccttctcgacggatcatcagaaaaaaacctaggcaa
cgcaagcagtggaacttccataatcccttcaaacaacagaacaatagtgaaaggttcatg
aaagaatctgaggtcgcagagaatgtcaactgtaacaataacagtgttggtgtacagcag
tccctccctcttccacctccactgccaggctattccagactcggagagcggcgttgggta
gtgccatccattcctgaaacagtggcaaagaggaagtgcttcaggaacaaccagagccac
atcaacacagcactggtttctgagctcaaattaagacttgaacagaagaaatggatgaac
caatgctag

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